diff --git a/Golden_Repo/f/Fiona/Fiona-1.8.22-GCCcore-11.2.0.eb b/Golden_Repo/f/Fiona/Fiona-1.8.22-GCCcore-11.2.0.eb
new file mode 100644
index 0000000000000000000000000000000000000000..d732894ce0e80f1e253cffcc68b1f98dd88d49cb
--- /dev/null
+++ b/Golden_Repo/f/Fiona/Fiona-1.8.22-GCCcore-11.2.0.eb
@@ -0,0 +1,47 @@
+easyblock = 'PythonBundle'
+
+name = 'Fiona'
+version = '1.8.22'
+
+homepage = 'https://github.com/Toblerity/Fiona'
+description = """Fiona is designed to be simple and dependable. It focuses on reading and writing data
+in standard Python IO style and relies upon familiar Python types and protocols such as files, dictionaries,
+mappings, and iterators instead of classes specific to OGR. Fiona can read and write real-world data using
+multi-layered GIS formats and zipped virtual file systems and integrates readily with other Python GIS
+packages such as pyproj, Rtree, and Shapely."""
+
+toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
+
+dependencies = [
+ ('Python', '3.10.4'),
+ ('GDAL', '3.5.0'),
+ ('Shapely', '1.8.5.post1'), # optional
+]
+
+use_pip = True
+
+exts_list = [
+ ('cligj', '0.7.2', {
+ 'checksums': ['a4bc13d623356b373c2c27c53dbd9c68cae5d526270bfa71f6c6fa69669c6b27'],
+ }),
+ ('click-plugins', '1.1.1', {
+ 'checksums': ['46ab999744a9d831159c3411bb0c79346d94a444df9a3a3742e9ed63645f264b'],
+ }),
+ ('munch', '2.5.0', {
+ 'checksums': ['2d735f6f24d4dba3417fa448cae40c6e896ec1fdab6cdb5e6510999758a4dbd2'],
+ }),
+ (name, version, {
+ 'checksums': ['a82a99ce9b3e7825740157c45c9fb2259d4e92f0a886aaac25f0db40ffe1eea3'],
+ }),
+]
+
+sanity_pip_check = True
+
+sanity_check_paths = {
+ 'files': ['bin/fio'],
+ 'dirs': ['lib/python%(pyshortver)s/site-packages'],
+}
+
+sanity_check_commands = ["fio --help"]
+
+moduleclass = 'data'
diff --git a/Golden_Repo/g/GDAL/GDAL-3.0.0_fix-python-CC-CXX.patch b/Golden_Repo/g/GDAL/GDAL-3.0.0_fix-python-CC-CXX.patch
new file mode 100644
index 0000000000000000000000000000000000000000..0304fbd0071b33c120f26dd4ac03ec1da122a4dd
--- /dev/null
+++ b/Golden_Repo/g/GDAL/GDAL-3.0.0_fix-python-CC-CXX.patch
@@ -0,0 +1,18 @@
+use $CC_SEQ and $CXX_SEQ values to redefine $CC and $CXX when building GDAL Python bindings,
+to ensure that correct compiler commands are used
+Kenneth Hoste (HPC-UGent)
+--- gdal-3.0.0/swig/python/setup.py.orig 2019-05-05 11:50:23.000000000 +0200
++++ gdal-3.0.0/swig/python/setup.py 2019-09-25 21:09:07.507467548 +0200
+@@ -24,6 +24,12 @@
+ if opt is not None:
+ os.environ['OPT'] = " ".join(f for f in opt.split() if f != '-Wstrict-prototypes')
+
++for key in ['CC', 'CXX']:
++ seqkey = '%s_SEQ' % key
++ if seqkey in os.environ:
++ os.environ[key] = os.environ[seqkey]
++ print('$%s set to %s (via $%s)' % (key, os.environ[key], seqkey))
++
+ # If CXX is defined in the environment, it will be used to link the .so
+ # but distutils will be confused if it is made of several words like 'ccache g++'
+ # and it will try to use only the first word.
diff --git a/Golden_Repo/g/GDAL/GDAL-3.6.0-GCCcore-11.3.0.eb b/Golden_Repo/g/GDAL/GDAL-3.5.0-GCCcore-11.3.0.eb
similarity index 78%
rename from Golden_Repo/g/GDAL/GDAL-3.6.0-GCCcore-11.3.0.eb
rename to Golden_Repo/g/GDAL/GDAL-3.5.0-GCCcore-11.3.0.eb
index 14185451aa515808a87076d57342a26cccb6eb0e..c7f123b2708437428fa102f0b9524e44b34f0717 100644
--- a/Golden_Repo/g/GDAL/GDAL-3.6.0-GCCcore-11.3.0.eb
+++ b/Golden_Repo/g/GDAL/GDAL-3.5.0-GCCcore-11.3.0.eb
@@ -1,7 +1,7 @@
easyblock = 'ConfigureMake'
name = 'GDAL'
-version = '3.6.0'
+version = '3.5.0'
homepage = 'https://www.gdal.org'
description = """GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style
@@ -15,9 +15,8 @@ source_urls = ['https://download.osgeo.org/gdal/%(version)s/']
sources = [SOURCELOWER_TAR_XZ]
patches = ['GDAL-3.0.0_fix-python-CC-CXX.patch']
checksums = [
- '630e34141cf398c3078d7d8f08bb44e804c65bbf09807b3610dcbfbc37115cc3', # gdal-3.3.2.tar.xz
- # GDAL-3.0.0_fix-python-CC-CXX.patch
- '223a0ed1afb245527d546bb19e4f80c00f768516ab106d82e53cf36b5a1a2381',
+ 'd49121e5348a51659807be4fb866aa840f8dbec4d1acba6d17fdefa72125bfc9', # gdal-3.5.0.tar.xz
+ '223a0ed1afb245527d546bb19e4f80c00f768516ab106d82e53cf36b5a1a2381', # GDAL-3.0.0_fix-python-CC-CXX.patch
]
builddependencies = [
@@ -25,24 +24,23 @@ builddependencies = [
]
dependencies = [
- ('binutils', '2.38'),
('Python', '3.10.4'),
- ('netCDF', '4.8.1', '-serial'),
- ('expat', '2.4.1'),
+ ('netCDF', '4.9.0', '-serial'),
+ ('expat', '2.4.8'),
('GEOS', '3.11.1'),
- ('SQLite', '3.36'),
- ('libxml2', '2.9.10'),
+ ('SQLite', '3.38.3'),
+ ('libxml2', '2.9.13'),
('libpng', '1.6.37'),
- ('libjpeg-turbo', '2.1.1'),
+ ('libjpeg-turbo', '2.1.3'),
('JasPer', '2.0.33'),
('LibTIFF', '4.3.0'),
- ('zlib', '1.2.11'),
- ('cURL', '7.78.0'),
+ ('zlib', '1.2.12'),
+ ('cURL', '7.83.0'),
('PCRE', '8.45'),
- ('PROJ', '8.1.0'),
- ('libgeotiff', '1.7.0'),
- ('SciPy-bundle', '2021.10', '', ('gcccoremkl', '11.2.0-2021.4.0')),
- ('HDF5', '1.12.1', '-serial'),
+ ('PROJ', '9.0.0'),
+ ('libgeotiff', '1.7.1'),
+ ('SciPy-bundle', '2022.05', '', ('gcccoremkl', '11.3.0-2022.1.0')),
+ ('HDF5', '1.12.2', '-serial'),
('HDF', '4.2.15'),
]
diff --git a/Golden_Repo/s/Shapely/Shapely-1.8.5.post1-GCCcore-11.3.0.eb b/Golden_Repo/s/Shapely/Shapely-1.8.5.post1-GCCcore-11.3.0.eb
new file mode 100644
index 0000000000000000000000000000000000000000..7b95febc86072581f3593a6c214146904b747584
--- /dev/null
+++ b/Golden_Repo/s/Shapely/Shapely-1.8.5.post1-GCCcore-11.3.0.eb
@@ -0,0 +1,25 @@
+easyblock = 'PythonPackage'
+
+name = 'Shapely'
+version = '1.8.5.post1'
+
+homepage = 'https://github.com/Toblerity/Shapely'
+description = """Shapely is a BSD-licensed Python package for manipulation and analysis of planar geometric objects.
+It is based on the widely deployed GEOS (the engine of PostGIS) and JTS (from which GEOS is ported) libraries."""
+
+toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
+
+source_urls = [PYPI_SOURCE]
+sources = [SOURCE_TAR_GZ]
+checksums = ['ef3be705c3eac282a28058e6c6e5503419b250f482320df2172abcbea642c831']
+
+dependencies = [
+ ('Python', '3.10.4'),
+ ('GEOS', '3.11.1'),
+]
+
+download_dep_fail = True
+use_pip = True
+sanity_pip_check = True
+
+moduleclass = 'math'