diff --git a/Golden_Repo/j/JupyterProxy-Matlab/JupyterProxy-Matlab-0.9.0-GCCcore-11.3.0-2023.3.6.eb b/Golden_Repo/j/JupyterProxy-Matlab/JupyterProxy-Matlab-0.9.0-GCCcore-11.3.0-2023.3.6.eb new file mode 100644 index 0000000000000000000000000000000000000000..a9163da038dd08343e9cfde7c9b0ca95df97ff52 --- /dev/null +++ b/Golden_Repo/j/JupyterProxy-Matlab/JupyterProxy-Matlab-0.9.0-GCCcore-11.3.0-2023.3.6.eb @@ -0,0 +1,136 @@ +easyblock = 'PythonBundle' + +name = 'JupyterProxy-Matlab' +version = '0.9.0' +local_jupyterver = '2023.3.6' +versionsuffix = '-' + local_jupyterver + +# only users of the UNIX-group 'matlab' must have access +# group = 'matlab' + +homepage = 'https://github.com/mathworks/jupyter-matlab-proxy' +description = """The MATLAB integration for Jupyter enables you to open a MATLAB desktop +in a web browser tab, directly from your Jupyter environment. +""" + +toolchain = {'name': 'GCCcore', 'version': '11.3.0'} +toolchainopts = {'pic': True} + +builddependencies = [ + ('binutils', '2.38'), + # check for existance + # ('MATLAB', '2023a'), + # ('XServer', '21.1.6'), +] + +dependencies = [ + ('Python', '3.10.4'), + ('JupyterLab', local_jupyterver), +] + +exts_defaultclass = 'PythonPackage' +exts_default_options = { + 'filter': ('python -c "import %(ext_name)s"', ''), + 'download_dep_fail': True, + 'source_urls': [PYPI_SOURCE], + 'use_pip': True, + 'sanity_pip_check': True, + 'use_pip_for_deps': False, +} + +exts_list = [ + # enable classic jupyter #### + ('jupyter_contrib_core', '0.4.2', { + 'checksums': [('sha256', '1887212f3ca9d4487d624c0705c20dfdf03d5a0b9ea2557d3aaeeb4c38bdcabb')], + }), + ('jupyter_highlight_selected_word', '0.2.0', { + 'checksums': [('sha256', '9fa740424859a807950ca08d2bfd28a35154cd32dd6d50ac4e0950022adc0e7b')], + }), + ('jupyter_nbextensions_configurator', '0.6.1', { + 'checksums': [('sha256', '4b9e1270ccc1f8e0a421efb8979a737f586813023a4855b9453f61c3ca599b82')], + }), + ('jupyter_contrib_nbextensions', '0.7.0', { + 'checksums': [('sha256', '06e33f005885eb92f89cbe82711e921278201298d08ab0d886d1ba09e8c3e9ca')], + }), + # core-packages #### + ('aiohttp-session', '2.12.0', { + 'checksums': [('sha256', '0ccd11a7c77cb9e5a61f4daacdc9170d561112f9cfaf9e9a2d9867c0587d1950')], + }), + ('matlab-proxy', '0.9.0', { + 'checksums': [ + ('sha256', 'd8e76ef8c5d89aab286ad5bad65ecbdde1dca8803e2101f7d13e6f3ee3cb5cb5'), + ], + }), + ('jupyter-matlab-proxy', '0.8.0', { + 'source_urls': ['https://github.com/mathworks/jupyter-matlab-proxy/archive/'], + 'source_tmpl': 'v%(version)s.tar.gz', + 'patches': [ + 'jupytermatlabproxy_timeout.patch', + ], + 'checksums': [ + ('sha256', 'b1785c8bed32d187c2fa15d921d047dd7483ec20442cdc5f34c0aad1ca06bac5'), + ('sha256', '4d15cc52352dc0cdeb03cc01285cf01cfe01393f3eee77fe1c2e205d691a5b8d'), + ], + }), +] + +postinstallcmds = [ + ( + '{ cat > %(installdir)s/bin/matlab; } << EOF \n' + '#!/bin/bash \n' + '\n' + '# Load required modules \n' + 'module purge \n' + 'module load Stages/${STAGE} \n' + 'module load GCCcore/.11.3.0 \n' + 'module load MATLAB \n' + 'module load XServer/21.1.6 \n' + '\n' + 'matlab "\$@" \n' + '\n' + 'EOF' + ), + 'chmod +x %(installdir)s/bin/matlab', + ( + '{ cat > %(installdir)s/bin/Xvfb; } << EOF \n' + '#!/bin/bash \n' + '\n' + '# Load required modules \n' + '# and ensure stderr stays empty as matlab-proxy seems to fail if not \n' + 'module purge 2>&1 \n' + 'module load Stages/${STAGE} 2>&1 \n' + 'module load GCCcore/.11.3.0 2>&1 \n' + 'module load MATLAB 2>&1 \n' + 'module load XServer/21.1.6 2>&1 \n' + '\n' + 'Xvfb "\$@" 2>&1\n' + '\n' + 'EOF' + ), + 'chmod +x %(installdir)s/bin/Xvfb' +] + + +modextravars = { + 'MWI_USE_EXISTING_LICENSE': 'True', + 'MWI_PROCESS_START_TIMEOUT': '600', +} + +# Jupyter-matlab-kernel DISABLED: +# https://github.com/mathworks/jupyter-matlab-proxy/issues/62 +modextrapaths = { + # 'MWI_CUSTOM_MATLAB_ROOT': 'lib/python%(pyshortver)s/site-packages/jupyter_matlab_proxy/', + # 'JUPYTER_PATH': ['share/jupyter'], # add search path for kernelspecs +} + +# Ensure that the user-specific $HOME/.local/share/jupyter is first entry in JUPYTHER_PATH +# modluafooter = """ +# prepend_path("JUPYTER_PATH", pathJoin(os.getenv("HOME"), ".local/share/jupyter")) +# """ + +sanity_check_paths = { + 'files': [], + 'dirs': ['lib/python%(pyshortver)s/site-packages'], +} + +moduleclass = 'tools'