#!/usr/bin/env python3 """Try to change from GCC11.2 to GCC11.3 For it, you need - Python3 """ import argparse releases = { 'ABINIT': ['9.6.2', '9.6.2'], 'ACTC': ['1.1', '1.1'], 'ADIOS2': ['2.7.1', '2.7.1'], 'Advisor': ['2021.4.0', '2021.4.0'], 'AMBER': ['20', '20'], 'ant-java': ['1.10.12', '1.10.12'], 'ANTLR': ['2.7.7', '2.7.7'], 'AOCC': ['3.1.0', '3.1.0'], 'AOCC': ['3.2.0', '3.2.0'], 'Apptainer-Tools': ['2022', '2022'], 'APR': ['1.7.0', '1.7.0'], 'APR-util': ['1.6.1', '1.6.1'], 'archspec': ['0.1.3', '0.1.3'], 'ARMForge': ['21.1.2', '21.1.2'], 'ARPACK-NG': ['3.8.0', '3.8.0'], 'ASE': ['3.22.0', '3.22.0'], 'ATK': ['2.36.0', '2.36.0'], 'AT-SPI2-ATK': ['2.38.0', '2.38.0'], 'AT-SPI2-core': ['2.40.3', '2.40.3'], 'Autoconf': ['2.71', '2.71'], 'Automake': ['1.16.4', '1.16.5'], 'Autotools': ['20210726', '20220317'], 'archspec': ['0.1.3', '0.1.4'], 'Bazel': ['3.7.2', '3.7.2'], 'BeautifulSoup': ['4.10.0', '4.10.0'], 'binutils': ['2.37', '2.38'], 'Biopython': ['1.79', '1.79'], 'Bison': ['3.6.4', '3.7.6'], 'Blender': ['3.1.2', '3.1.2'], 'BLIS': ['0.8.1', '0.9.0'], 'Blosc': ['1.21.1', '1.21.1'], 'bokeh': ['2.4.1', '2.4.1'], 'Boost': ['1.78.0', '1.78.0'], 'Boost.Python': ['1.78.0', '1.78.0'], 'Brotli': ['1.0.9', '1.0.9'], 'bzip2': ['1.0.8', '1.0.8'], 'cairo': ['1.16.0', '1.16.0'], 'Cartopy': ['0.20.0', '0.20.0'], 'ccache': ['4.3', '4.3'], 'CDO': ['2.0.2', '2.0.2'], 'ceres-solver': ['2.0.0', '2.0.0'], 'CFITSIO': ['4.0.0', '4.0.0'], 'CGAL': ['5.2', '5.2'], 'CGNS': ['4.2.0', '4.2.0'], 'Cirq': ['0.13.1', '0.14.1'], 'Cirq': ['0.14.1', '0.14.1'], 'Clang': ['13.0.1', '13.0.1'], 'Cling': ['0.9', '0.9'], 'CMake': ['3.23.1', '3.23.1'], 'Code_Saturne': ['7.0.2', '7.0.2'], 'Colmap': ['3.7', '3.7'], 'CoordgenLibs': ['3.0.1', '3.0.1'], 'Coreutils': ['9.0', '9.0'], 'CP2K': ['9.1.0', '9.1.0'], 'CPMD': ['4.3', '4.3'], 'cppcheck': ['2.6', '2.6'], 'cppy': ['1.1.0', '1.2.1'], 'CUDA': ['11.5', '11.7.0'], 'cuDNN': ['8.3.1.22', '8.6.0.163'], 'cURL': ['7.78.0', '7.78.0'], 'cuTENSOR': ['1.4.0.6', '1.4.0.6'], 'CVS': ['1.11.23', '1.11.23'], 'CVXOPT': ['1.2.7', '1.2.7'], 'darshan-runtime': ['3.4.0', '3.4.0'], 'darshan-util': ['3.4.0', '3.4.0'], 'dask': ['2021.9.1', '2021.9.1'], 'DB': ['18.1.40', '18.1.40'], 'DBus': ['1.13.18', '1.14.0'], 'distributed': ['2.30.1', '2.30.1'], 'double-conversion': ['3.1.6', '3.1.6'], 'Doxygen': ['1.9.1', '1.9.1'], 'DWave': ['4.2.0', '4.2.0'], 'ecCodes': ['2.22.1', '2.22.1'], 'Eigen': ['3.3.9', '3.4.0'], 'elfutils': ['0.185', '0.185'], 'ELPA': ['2021.11.001', '2021.11.001'], 'Emacs': ['27.1', '27.1'], 'Embree': ['3.13.2', '3.13.2'], 'ESMF': ['8.2.0', '8.2.0'], 'eudev': ['3.2.9', '3.2.9'], 'Exiv2': ['0.27.5', '0.27.5'], 'expat': ['2.4.1', '2.4.1'], 'expecttest': ['0.1.3', '0.1.3'], 'Extrae': ['3.8.3', '3.8.3'], 'FFmpeg': ['4.4.1', '4.4.2'], 'FFTW': ['3.3.10', '3.3.10'], 'Fiona': ['1.8.20', '1.8.20'], 'Flask': ['2.0.2', '2.0.2'], 'flatbuffers': ['2.0.0', '2.0.0'], 'flatbuffers-python': ['2.0', '2.0'], 'flex': ['2.6.4', '2.6.4'], 'FLINT': ['2.7.1', '2.7.1'], 'FLTK': ['1.3.7', '1.3.7'], 'fmt': ['8.1.1', '8.1.1'], 'fontconfig': ['2.13.94', '2.13.94'], 'freeglut': ['3.2.1', '3.2.1'], 'FreeImage': ['3.18.0', '3.18.0'], 'FreeSurfer': ['7.1.1', '7.1.1'], 'freetype': ['2.11.0', '2.11.0'], 'FriBidi': ['1.0.10', '1.0.12'], 'g2clib': ['1.6.3', '1.6.3'], 'g2lib': ['3.2.0', '3.2.0'], 'gc': ['8.2.0', '8.2.0'], 'GCC': ['11.2.0', '11.3.0'], 'GDAL': ['3.3.2', '3.3.2'], 'GDB': ['11.1', '11.1'], 'Gdk-Pixbuf': ['2.42.6', '2.42.6'], 'GEOS': ['3.9.1', '3.9.1'], 'gettext': ['0.21', '0.21'], 'gflags': ['2.2.2', '2.2.2'], 'Ghostscript': ['9.54.0', '9.54.0'], 'giflib': ['5.2.1', '5.2.1'], 'git': ['2.33.1', '2.33.1'], 'git-lfs': ['2.11.0', '2.11.0'], 'GL2PS': ['1.4.2', '1.4.2'], 'GLib': ['2.69.1', '2.69.1'], 'GLM': ['0.9.9.8', '0.9.9.8'], 'glog': ['0.5.0', '0.5.0'], 'GLPK': ['5.0', '5.0'], 'GMP': ['6.2.1', '6.2.1'], 'gmpy2': ['2.1.0b5', '2.1.0b5'], 'gnuplot': ['5.4.2', '5.4.2'], 'GObject-Introspection': ['1.68-0', '1.68-0'], 'Go': ['1.17.3', '1.17.3'], 'gomkl': ['2021b', '2021b'], 'gompi': ['2021b', '2021b'], 'GPAW': ['21.6.0', '21.6.0'], 'GPAW-setups': ['0.9.9672', '0.9.9672'], 'gperf': ['3.1', '3.1'], 'GPicView': ['0.2.5', '0.2.5'], 'gpsmkl': ['2021b', '2021b'], 'gpsmpi': ['2021b', '2021b'], 'Grace': ['5.1.25', '5.1.25'], 'GraphicsMagick': ['1.3.36', '1.3.36'], 'Graphviz': ['2.49.3', '2.49.3'], 'groff': ['1.22.4', '1.22.4'], 'GROMACS': ['2021.4', '2021.4'], 'gsettings-desktop-schemas': ['3.34.0', '3.34.0'], 'GSL': ['2.7', '2.7'], 'GStreamer': ['1.18.6', '1.18.6'], 'GTK+': ['3.24.23', '3.24.23'], 'GtkSourceView': ['4.4.0', '4.4.0'], 'GTS': ['0.7.6', '0.7.6'], 'guile': ['2.0.14', '2.0.14'], 'guile': ['3.0.7', '3.0.7'], 'gzip': ['1.10', '1.12'], 'h5py': ['3.5.0', '3.5.0'], 'HarfBuzz': ['2.8.2', '2.8.2'], 'Harminv': ['1.4.1', '1.4.1'], 'HDF5': ['1.12.1', '1.12.1'], 'HDF': ['4.2.15', '4.2.15'], 'HDFView': ['3.1.3', '3.1.3'], 'help2man': ['1.48.3', '1.48.3'], 'Horovod': ['0.24.3', '0.24.3'], 'Horovod': ['0.25.0', '0.25.0'], 'HTSlib': ['1.14', '1.14'], 'hwloc': ['2.5.0', '2.5.0'], 'hypothesis': ['6.14.6', '6.46.7'], 'Hypre': ['2.23.0', '2.23.0'], 'Hypre': ['2.25.0', '2.25.0'], 'ICU': ['70.1', '70.1'], 'iimpi': ['2021b', '2021b'], 'ImageMagick': ['7.1.0-13', '7.1.0-13'], 'imkl': ['2021.4.0', '2021.4.0'], 'impi': ['2021.4.0', '2021.4.0'], 'Inspector': ['2022.0.0', '2022.0.0'], 'intel-compilers': ['2021.4.0', '2021.4.0'], 'intel': ['2021b', '2021b'], 'intel-para': ['2021b', '2021b'], 'intltool': ['0.51.0', '0.51.0'], 'iomkl': ['2021b', '2021b'], 'iompi': ['2021b', '2021b'], 'ipp': ['2021.5.1', '2021.5.1'], 'ipsmpi': ['2021b', '2021b'], 'IRkernel': ['1.3', '1.3'], 'ISL': ['0.24', '0.24'], 'ispc': ['1.16.1', '1.16.1'], 'itac': ['2021.5.0', '2021.5.0'], 'ITK': ['5.2.1', '5.2.1'], 'ITSTool': ['2.0.7', '2.0.7'], 'Java': ['15', '15'], 'jax': ['0.3.14', '0.3.14'], 'jbigkit': ['2.1', '2.1'], 'jemalloc': ['5.2.1', '5.2.1'], 'JsonCpp': ['1.9.4', '1.9.4'], 'Julia': ['1.7.1', '1.7.1'], 'kim-api': ['2.2.1', '2.2.1'], 'LAME': ['3.100', '3.100'], 'LAMMPS': ['7Jan2022', '7Jan2022'], 'LCov': ['1.15', '1.15'], 'libaec': ['1.0.6', '1.0.6'], 'libaio': ['0.3.112', '0.3.112'], 'libarchive': ['3.5.1', '3.5.1'], 'libcerf': ['1.17', '1.17'], 'libcint': ['4.4.0', '4.4.0'], 'libcroco': ['0.6.13', '0.6.13'], 'libctl': ['4.5.1', '4.5.1'], 'libdap': ['3.20.8', '3.20.8'], 'libdeflate': ['1.10', '1.10'], 'libdrm': ['2.4.108', '2.4.108'], 'libdwarf': ['20210528', '20210528'], 'libelf': ['0.8.13', '0.8.13'], 'libepoxy': ['1.5.9', '1.5.9'], 'libevent': ['2.1.12', '2.1.12'], 'libffi': ['3.4.2', '3.4.2'], 'libgd': ['2.3.1', '2.3.1'], 'libGDSII': ['0.21', '0.21'], 'libgeotiff': ['1.7.0', '1.7.0'], 'libgit2': ['1.1.1', '1.1.1'], 'libglvnd': ['1.3.3', '1.3.3'], 'libiconv': ['1.16', '1.16'], 'Libint': ['2.7.0-beta.6', '2.7.0-beta.6'], 'libjpeg-turbo': ['2.1.1', '2.1.3'], 'libreadline': ['8.0', '8.1'], 'librsvg': ['2.48.8', '2.51.2'], 'LibTIFF': ['4.3.0', '4.3.0'], 'libunwind': ['1.4,0', '1.5.0'], 'libxc': ['5.1.5', '5.1.6'], 'libxml2': ['2.9.10', '2.9.13'], 'libyaml': ['0.2.5', '0.2.5'], 'LAME': ['3.100', '3.100'], 'LLVM': ['10.0.1', '13.0.0'], 'lz4': ['1.9.3', '1.9.3'], 'M4': ['1.4.18', '1.4.19'], 'magma': ['2.6.1', '2.6.2'], 'Mako': ['1.1.3', '1.1.4'], 'matplotlib': ['3.4.2', '3.5.2'], 'Meson': ['0.55.0', '0.58.2'], 'MPFR': ['4.1.0', '4.1.0'], 'NASM': ['2.15.03', '2.15.05'], 'NSS': ['3.51', '3.69'], 'netCDF': ['4.7.4', '4.8.1'], 'numactl': ['2.0.14', '2.0.15'], 'OpenEXR': ['2.5.2', '3.1.1'], 'OpenGL': ['2020', '2021b'], 'Pango': ['1.44.7', '1.48.8'], 'parallel': ['20201122', '20210722'], 'PCRE2': ['10.34', '10.37'], 'PCRE': ['8.44', '8.45'], 'Perl': ['5.32.0', '5.34.0'], 'pkg-config': ['0.29.2', '0.29.2'], 'pkgconfig': ['1.5.4', '1.5.5'], 'Pillow-SIMD': ['9.0.1', '9.2.0'], 'PROJ': ['7.1.0', '8.1.0'], 'PLUMED': ['2.6.1', '2.7.2'], 'protobuf': ['3.17.3', '3.19.4'], 'protobuf-python': ['3.17.3', '3.19.4'], 'psmpi': ['5.4.9-1', '5.5.0-1'], 'pybind11': ['2.7.1', '2.9.2'], 'pyproj': ['2.6.1.post1', '3.3.0'], 'Python': ['3.8.5', '3.9.6'], 'PyTorch': ['1.8.1', '1.11'], 'PyYAML': ['5.4.1', '6.0'], 'Qhull': ['2020.1', '2020.2'], 'Qt5': ['5.14.2', '5.15.2'], 'RDFlib': ['5.0.0', '6.0.2'], 're2c': ['1.3', '2.2'], 'Rust': ['1.47.0', '1.54.0'], 'scikit': ['2021', '2022'], 'SciPy-Stack': ['2021', '2021b'], 'SciPy-bundle': ['2021.10', '22.05'], 'Shapely': ['1.7.1', '1.8.0'], 'SuiteSparse': ['5.7.1', '5.10.1'], 'snappy': ['1.1.8', '1.1.9'], 'SQLite': ['3.32.3', '3.36'], 'Tcl': ['8.6.10', '8.6.11'], 'texinfo': ['6.7', '6.8'], 'Tkinter': ['3.9.6', '3.10.4'], 'texlive': ['20200406', '20200406'], 'torchvision': ['0.9.1', '0.12.0'], 'tqdm': ['4.62.3', '4.62.3'], 'trimesh': ['3.8.11', '3.9.36'], 'UDUNITS': ['2.2.26', '2.2.28'], 'uftp': ['1.4.1', '1.4.2'], 'X11': ['20200222', '20210802'], 'x264': ['20210613', '20220620'], 'x265': ['3.4', '3.5'], 'XServer': ['1.20.9', '1.20.13'], 'zlib': ['1.2.11', '1.2.12'], 'zstd': ['1.5.0', '1.5.2'], } def parse_arguments(): """Receives command line input""" parser = argparse.ArgumentParser(description='Command line options.') parser.add_argument('-i', metavar='INPUT', default="", type=str, help='Input File') parser.add_argument('-o', metavar='OLDRELEASE', default="", type=str, help='Current version of given software to be replaced') parser.add_argument('-n', metavar='LATESTRELEASE', default="", type=str, help='Most recent version of given software') return parser.parse_args() def updateFileName(fileName, current, latest): """Tries to bring filename automatically to the latest toolchain""" if current and latest: fileName = fileName.replace(current, latest, 1) if fileName: fileName = fileName.replace(releases['GCC'][0], releases['GCC'][1], 1) if 'gcccoremkl' in fileName: fileName = fileName.replace( releases['imkl'][0], releases['imkl'][1], 1) elif 'gomkl' in fileName: fileName = fileName.replace( releases['gomkl'][0], releases['gomkl'][1], 1) elif 'gpsmpi' in fileName: fileName = fileName.replace( releases['gpsmpi'][0], releases['gpsmpi'][1], 1) elif 'gpsmkl' in fileName: fileName = fileName.replace( releases['gpsmkl'][0], releases['gpsmkl'][1], 1) elif 'ipsmpi' in fileName: fileName = fileName.replace( releases['ipsmpi'][0], releases['ipsmpi'][1], 1) elif 'intel-para' in fileName: fileName = fileName.replace( releases['intel-para'][0], releases['intel-para'][1], 1) fileName = fileName.replace( '-Python-3.8.5', '', 1) return fileName def updateFile(oldName, newName, current, latest): versionSuffixIsPython = False """Replaces toolchain, cleans up site_contacts and goes through the list of releases with the new one""" if newName is not oldName: newFile = open(newName, 'w') with open(oldName) as file: for line in file: if current and latest: if line.startswith('version'): print("Changing package version...") line = line.replace(current, latest, 1) if line.startswith('toolchain'): print("Fixing toolchain...") line = line.replace( releases['GCC'][0], releases['GCC'][1], 1) line = line.replace( releases['imkl'][0], releases['imkl'][1], 1) line = line.replace( releases['gomkl'][0], releases['gomkl'][1], 1) line = line.replace( releases['gpsmpi'][0], releases['gpsmpi'][1], 1) line = line.replace( releases['ipsmpi'][0], releases['ipsmpi'][1], 1) line = line.replace( releases['intel-para'][0], releases['intel-para'][1], 1) line = line.replace( releases['gcccoremkl'][0], releases['gcccoremkl'][1], 1) if line.startswith('site_contacts'): print("Removing site_contacts") line = "" for key in releases: if key in line: print("Changing", key, "from", releases[key][0], "to", releases[key][1]) line = line.replace( releases[key][0], releases[key][1], 1) if line.startswith("versionsuffix = '-Python"): print("Removing python version suffix") versionSuffixIsPython = True line = '' if versionSuffixIsPython: line = line.replace(', versionsuffix', '', 1) newFile.write(line) newFile.close() return True else: print("Files are the same") return False if __name__ == "__main__": args = parse_arguments() newFile = updateFileName(args.i, args.o, args.n) if updateFile(args.i, newFile, args.o, args.n): print("Updated", args.i, ' to GCC', releases['GCC'][1], 'and to version', args.n) print("Run: \n\neb -l %s" % newFile)