From 696e8a29332c99ea1b9524fe71b2d6cafb9d3123 Mon Sep 17 00:00:00 2001
From: Michael <m.langguth@fz-juelich.de>
Date: Wed, 10 Feb 2021 13:50:49 +0100
Subject: [PATCH] Remove script_dir and exp_id from argument list in
preprocess_data_era5_step1_template.sh .
---
.../preprocess_data_era5_step1_template.sh | 11 ++++-------
1 file changed, 4 insertions(+), 7 deletions(-)
diff --git a/video_prediction_tools/HPC_scripts/preprocess_data_era5_step1_template.sh b/video_prediction_tools/HPC_scripts/preprocess_data_era5_step1_template.sh
index ef03438f..631b1a98 100644
--- a/video_prediction_tools/HPC_scripts/preprocess_data_era5_step1_template.sh
+++ b/video_prediction_tools/HPC_scripts/preprocess_data_era5_step1_template.sh
@@ -40,21 +40,18 @@ variables=( "t2" "t2" "t2" )
lat_inds=( 74 202 )
lon_inds=( 550 710 )
-max_year=$( printf "%d\n" "${years[@]}" | sort -n | tail -1 )
-min_year=$( printf "%d\n" "${years[@]}" | sort -nr | tail -1 )
# set some paths
# note, that destination_dir is used during runtime to set a proper experiment directory
-source_dir=/p/scratch/deepacf/video_prediction_shared_folder/extractedData
-destination_dir=/p/project/deepacf/deeprain/video_prediction_shared_folder/preprocessedData/era5-Y${min_year}to${max_year}M01to12
-script_dir=`pwd`
+source_dir=/p/project/deepacf/deeprain/video_prediction_shared_folder/
+destination_dir=/p/project/deepacf/deeprain/video_prediction_shared_folder/
# execute Python-scripts
for year in "${years[@]}"; do
echo "Year $year"
echo "source_dir ${source_dir}/${year}"
srun python ../main_scripts/main_preprocess_data_step1.py \
- --source_dir ${source_dir} -scr_dir ${script_dir} -exp_id ${exp_id} \
- --destination_dir ${destination_dir} --years ${year} --vars ${variables[0]} ${variables[1]} ${variables[2]}
+ --source_dir ${source_dir} --destination_dir ${destination_dir} --years ${year} \
+ --vars ${variables[0]} ${variables[1]} ${variables[2]}
--lat_s ${lat_inds[0]} --lat_e ${lat_inds[1]} --lon_s ${lon_inds[0]} --lon_e ${lon_inds[1]}
done
--
GitLab