diff --git a/env_setup/create_env.sh b/env_setup/create_env.sh new file mode 100755 index 0000000000000000000000000000000000000000..b766768f4fdfa6897c4d781b78d82050dc75dedc --- /dev/null +++ b/env_setup/create_env.sh @@ -0,0 +1,25 @@ +#!/usr/bin/env bash + +if [[ ! -n "$1" ]]; then + echo "Provide the user name, which will be taken as folder name" + exit 1 +fi + +FOLDER_NAME=$1 +WORKING_DIR=/p/project/deepacf/deeprain/${FOLDER_NAME}/Video_Prediction_SAVP +ENV_DIR=${WORKING_DIR}/env_setup + +source ${ENV_DIR}/modules.sh +# Install additional Python packages. +pip3 install --ignore-installed -r requirement.txt +#pip3 install --user netCDF4 +#pip3 install --user numpy + +#Copy the hickle package from bing's account +cd ENV_DIR +cp -r /p/project/deepacf/deeprain/bing/hickle . +export PYTHONPATH=${ENV_DIR}/hickle/lib/python3.6/site-packages:$PYTHONPATH +export PYTHONPATH=${WORKING_DIR}:$PYTHONPATH +export PYTHONPATH=/p/home/jusers/${USER}/juwels/.local/bin:$PYTHONPATH + + diff --git a/env_setup/modules.sh b/env_setup/modules.sh index 0a628b1bc9de3c1303aa07153cda2514149239bb..a3231ded353a1f1d3cddbe5f5613ec76f0538642 100755 --- a/env_setup/modules.sh +++ b/env_setup/modules.sh @@ -1,7 +1,7 @@ #!/usr/bin/env bash module --force purge module /usr/local/software/jureca/OtherStages -module load Stages/2019a +module load Stages/2020 module load Intel/2019.3.199-GCC-8.3.0 ParaStationMPI/5.2.2-1 module load mpi4py/3.0.1-Python-3.6.8 diff --git a/scripts/create_env.sh b/scripts/create_env.sh deleted file mode 100755 index 212c4ba239ecdbd15c70c05b9336c32175dc8c5c..0000000000000000000000000000000000000000 --- a/scripts/create_env.sh +++ /dev/null @@ -1 +0,0 @@ -#!/usr/bin/env bash \ No newline at end of file