diff --git a/HPC_setup/requirements_JUWELS_additionals.txt b/HPC_setup/requirements_JUWELS_additionals.txt index 193ed6f07b8af8d394353428f495eae8841142d3..ebfac3cd0d989a8845f2a3fceba33d562b898b8d 100644 --- a/HPC_setup/requirements_JUWELS_additionals.txt +++ b/HPC_setup/requirements_JUWELS_additionals.txt @@ -1,70 +1,15 @@ -tensorflow==2.5.0 -numpy==1.19.5 -six==1.15.0 -absl-py==0.11.0 -aiohttp==3.7.4 -appdirs==1.4.4 -astor==0.8.1 astropy==4.1 -attrs==20.3.0 bottleneck==1.3.2 cached-property==1.5.2 -certifi==2020.12.5 -cftime==1.4.1 -cchardet==2.1.7 -coverage==5.4 -cycler==0.10.0 -dask==2.22.0 -dill==0.3.3 -fsspec==0.8.5 -gast==0.4.0 -grpcio==1.34.0 -h5py==3.1.0 -idna==2.10 -importlib-metadata==3.4.0 iniconfig==1.1.1 -ipython==7.28.0 -kiwisolver==1.3.1 -locket==0.2.1 -Markdown==3.3.3 -matplotlib==3.3.4 -mock==4.0.3 -netCDF4==1.5.5.1 ordered-set==4.0.2 -packaging==20.9 -pandas==1.1.5 -partd==1.1.0 -patsy==0.5.1 -Pillow==8.1.0 -pluggy==0.13.1 -protobuf==3.15.0 -psutil==5.8.0 -py==1.10.0 -pydot==1.4.2 -pyparsing==2.4.7 pyshp==2.1.3 -pytest==6.2.2 -pytest-cov==2.11.1 pytest-html==3.1.1 pytest-lazy-fixture==0.6.3 pytest-metadata==1.11.0 pytest-sugar==0.9.4 -python-dateutil==2.8.1 -pytz==2021.1 -PyYAML==5.4.1 -requests==2.25.1 -scipy==1.5.2 -seaborn==0.11.1 ---no-binary shapely Shapely==1.7.0 -statsmodels==0.12.2 tabulate==0.8.8 -termcolor==1.1.0 -toml==0.10.2 -toolz==0.11.1 -typing-extensions==3.7.4.3 -urllib3==1.26.3 -Werkzeug==1.0.1 wget==3.2 -xarray==0.16.2 -zipp==3.4.0 -#Cartopy==0.18.0 \ No newline at end of file +--no-binary shapely Shapely==1.7.0 + +#Cartopy==0.18.0 diff --git a/HPC_setup/setup_venv_juwels.sh b/HPC_setup/setup_venv_juwels.sh index 7788c124fdbd997789811d32dccab8b04894b0ae..b4936e76a32ba31b316eccba0d2c65da859d135c 100755 --- a/HPC_setup/setup_venv_juwels.sh +++ b/HPC_setup/setup_venv_juwels.sh @@ -29,10 +29,8 @@ echo "##### START INSTALLING requirements_JUWELS_additionals.txt #####" pip install -r ${cur}/requirements_JUWELS_additionals.txt echo "##### FINISH INSTALLING requirements_JUWELS_additionals.txt #####" -pip install -r ${cur}/requirements_JUWELS_additionals.txt -pip install netcdf4 -pip install --ignore-installed matplotlib==3.2.0 -pip install --ignore-installed pandas==1.0.1 +# pip install --ignore-installed matplotlib==3.2.0 +# pip install --ignore-installed pandas==1.0.1 pip install -U typing_extensions # Comment: Maybe we have to export PYTHONPATH a second time ater activating the venv (after job allocation)