diff --git a/requirements.txt b/requirements.txt index 5cb2d3ade13e89f12378cee318f644b0e8b87fc8..892905b3f4024c3e82a2d48edccb9c8fd0d87ab7 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,69 +1,444 @@ -absl-py==0.11.0 +## this is basically the "pip list --format=freeze" output from a fully loaded venv_juwels ## + +absl-py==0.12.0 +aiohttp==3.6.2 +alabaster==0.7.12 +alembic==1.4.2 +altair==3.3.0 +ansi2html==1.5.2 +ansiwrap==0.8.4 +anyio==3.2.1 +apipkg==1.5 appdirs==1.4.4 +appmode==0.6.0 +argcomplete==1.12.0 +argon2-cffi==20.1.0 +arviz==0.10.0 +asn1crypto==1.3.0 astor==0.8.1 +astroid==2.4.2 astropy==4.1 -attrs==20.3.0 -bottleneck==1.3.2 +astunparse==1.6.3 +async-generator==1.10 +async-timeout==3.0.1 +atomicwrites==1.4.0 +attrs==19.3.0 +autobahn==19.10.1 +Automat==0.8.0 +autopep8==1.4.4 +Babel==2.7.0 +backcall==0.2.0 +backports.shutil-get-terminal-size==1.0.0 +backports.tempfile==1.0 +backports.weakref==1.0.post1 +bcrypt==3.1.7 +bitstring==3.1.7 +black==19.3b0 +bleach==3.3.0 +blist==1.3.6 +bokeh==2.3.2 +Bottleneck==1.3.2 +bqplot==0.12.26 +CacheControl==0.12.6 cached-property==1.5.2 -certifi==2020.12.5 -cftime==1.4.1 -chardet==4.0.0 -coverage==5.4 +cachetools==4.2.2 +cachy==0.3.0 +certifi==2020.6.20 +certipy==0.1.3 +cffi==1.14.1 +cftime==1.2.1 +chardet==3.0.4 +cleo==0.8.1 +click==7.1.2 +clikit==0.6.2 +cloudpickle==1.6.0 +ClusterShell==1.8.3 +colorama==0.4.1 +colorcet==2.0.2 +commonmark==0.9.1 +configparser==5.0.0 +constantly==15.1.0 +coverage==5.1 +crashtest==0.3.1 +cryptography==3.0 +cssselect==1.1.0 cycler==0.10.0 -dask==2.22.0 +Cython==0.29.21 +dash==1.16.0 +dash-bio==0.4.8 +dash-bootstrap-components==0.10.5 +dash-canvas==0.1.0 +dash-core-components==1.12.0 +dash-cytoscape==0.2.0 +dash-daq==0.5.0 +dash-html-components==1.1.1 +dash-player==0.0.1 +dash-renderer==1.8.0 +dash-table==4.10.1 +dask==2021.4.1 +dask-jobqueue==0.7.2 +dask-labextension==5.0.1 +datashader==0.11.1 +datashape==0.5.2 +deap==1.3.1 +debugpy==1.4.0 +decorator==4.4.2 +defusedxml==0.6.0 +deprecation==2.1.0 +dicom-upload==0.2.0 dill==0.3.3 -fsspec==0.8.5 +distlib==0.3.1 +distributed==2.30.1 +distro==1.5.0 +docutils==0.15.2 +ecdsa==0.15 +entrypoints==0.3 +execnet==1.7.1 +fastcore==1.3.6 +fastscript==1.0.0 +filelock==3.0.12 +flake8==3.8.3 +Flask==1.1.2 +Flask-Caching==1.9.0 +Flask-Compress==1.4.0 +flatbuffers==1.12 +flit-core==3.2.0 +fsspec==0.6.2 +funcsigs==1.0.2 +future==0.18.2 gast==0.4.0 -grpcio==1.34.0 +gitdb2==2.0.6 +GitPython==3.0.4 +google-auth==1.30.0 +google-auth-oauthlib==0.4.4 +google-pasta==0.2.0 +grako==3.99.9 +graphviz==0.13.2 +grpcio==1.34.1 +gviz-api==1.9.0 h5py==3.1.0 +HeapDict==1.0.1 +hiredis==1.1.0 +holoviews==1.13.2 +html5lib==1.1 +hyperlink==19.0.0 +hypothesis==4.44.2 +icc-rt==2020.0.133 idna==2.10 +idna-ssl==1.1.0 +imageio==2.9.0 +imagesize==1.1.0 importlib-metadata==3.4.0 +incremental==17.5.0 iniconfig==1.1.1 -kiwisolver==1.3.1 -locket==0.2.1 -Markdown==3.3.3 -matplotlib==3.3.4 -mock==4.0.3 -netCDF4==1.5.5.1 -numpy==1.19.5 +intel-openmp==2020.0.133 +ipaddress==1.0.23 +ipydatawidgets==4.2.0 +ipykernel==6.0.3 +ipyleaflet==0.14.0 +ipympl==0.7.0 +ipynb==0.5.1 +ipyparallel==6.3.0 +ipython==7.16.1 +ipython-genutils==0.2.0 +ipythonblocks==1.9.0 +ipyvolume==0.6.0a8 +ipyvue==1.5.0 +ipyvuetify==1.6.2 +ipywebrtc==0.6.0 +ipywidgets==7.6.3 +isodate==0.6.0 +isort==4.3.21 +itk-core==5.2.1 +itk-filtering==5.2.1 +itk-io==5.2.1 +itk-meshtopolydata==0.7.1 +itk-numerics==5.2.1 +itk-registration==5.2.1 +itk-segmentation==5.2.1 +itsdangerous==1.1.0 +jedi==0.17.2 +jeepney==0.6.0 +Jinja2==2.11.2 +joblib==0.17.0 +jsfileupload==0.2.0 +json5==0.8.5 +jsonschema==3.2.0 +jupyter-bokeh==3.0.0 +jupyter-client==6.1.12 +jupyter-contrib-core==0.3.3 +jupyter-contrib-nbextensions==0.5.1 +jupyter-core==4.8.1 +jupyter-dash==0.4.0 +jupyter-highlight-selected-word==0.2.0 +jupyter-kernel-gateway==2.5.1 +jupyter-latex-envs==1.4.6 +jupyter-lsp==1.4.1 +jupyter-nbextensions-configurator==0.4.1 +jupyter-packaging==0.10.5 +jupyter-resource-usage==0.6.0 +jupyter-server==1.11.0 +jupyter-server-mathjax==0.2.3 +jupyter-server-proxy==3.1.0 +jupyter-telemetry==0.1.0 +jupyterhub==1.4.2 +jupyterlab==3.1.12 +jupyterlab-code-formatter==1.4.10 +jupyterlab-controlbtn==0.5.0 +jupyterlab-favorites==3.0.0 +jupyterlab-git==0.32.4 +jupyterlab-gitlab==3.0.0 +jupyterlab-iframe==0.4.0 +jupyterlab-latex==3.1.0 +jupyterlab-launcher==0.13.1 +jupyterlab-lsp==3.8.1 +jupyterlab-pygments==0.1.2 +jupyterlab-recents==3.0.1 +jupyterlab-server==2.8.1 +jupyterlab-spellchecker==0.7.1 +jupyterlab-system-monitor==0.8.0 +jupyterlab-topbar==0.6.1 +jupyterlab-tour==3.1.3 +jupyterlab-widgets==1.0.2 +jupyterthemes==0.20.0 +keras-nightly==2.5.0.dev2021032900 +Keras-Preprocessing==1.1.2 +keyring==21.8.0 +kiwisolver==1.2.0 +lazy-object-proxy==1.4.3 +lesscpy==0.14.0 +liac-arff==2.4.0 +line-profiler==3.1.0 +llvmlite==0.36.0 +locket==0.2.0 +lockfile==0.12.2 +lxml==4.5.2 +Mako==1.1.3 +Markdown==3.3.4 +MarkupSafe==1.1.1 +matplotlib==3.3.1 +matplotlib-inline==0.1.2 +mccabe==0.6.1 +memory-profiler==0.55.0 +mistune==0.8.4 +mock==4.0.2 +more-itertools==8.4.0 +mpmath==1.1.0 +msgpack==1.0.0 +multidict==4.7.5 +multipledispatch==0.6.0 +nbclassic==0.3.2 +nbclient==0.5.2 +nbconvert==6.1.0 +nbdime==3.1.0 +nbformat==5.1.2 +nest-asyncio==1.5.1 +netaddr==0.8.0 +netCDF4==1.5.4 +netifaces==0.10.9 +networkx==2.4 +nose==1.3.7 +notebook==6.4.3 +numba==0.53.1 +numexpr==2.7.1 +numpy==1.19.4 +oauthlib==3.1.0 +olefile==0.46 +opt-einsum==3.3.0 ordered-set==4.0.2 -packaging==20.9 -pandas==1.1.5 +packaging==20.4 +pamela==1.0.0 +pandas==1.1.0 +pandocfilters==1.4.3 +panel==0.9.5 +papermill==2.2.2 +param==1.9.3 +paramiko==2.7.1 +parso==0.7.1 partd==1.1.0 +pastel==0.2.1 +pathlib2==2.3.5 +pathspec==0.6.0 patsy==0.5.1 -Pillow==8.1.0 +paycheck==1.0.2 +pbr==5.4.5 +pep8==1.7.1 +pexpect==4.8.0 +pickleshare==0.7.5 +Pillow==7.2.0 +pip==20.1.1 +pkginfo==1.7.0 +plotly==4.14.3 pluggy==0.13.1 -protobuf==3.15.0 -psutil==5.8.0 -py==1.10.0 -pydot==1.4.2 +ply==3.11 +poetry==1.1.6 +poetry-core==1.0.3 +portpicker==1.3.1 +prometheus-client==0.9.0 +prompt-toolkit==3.0.5 +protobuf==3.17.3 +prov==1.5.3 +psutil==5.7.2 +psycopg2==2.8.5 +ptvsd==4.3.2 +ptyprocess==0.6.0 +pvlink==0.3.1 +py==1.9.0 +pyasn1==0.4.8 +pyasn1-modules==0.2.8 +pycodestyle==2.6.0 +pycparser==2.20 +pycrypto==2.6.1 +pyct==0.4.6 +pydicom==1.4.2 +pydocstyle==5.0.2 +pydot==1.4.1 +pydotplus==2.0.2 +pydub==0.23.1 +pyflakes==2.2.0 +Pygments==2.6.1 +PyHamcrest==1.9.0 +PyJWT==1.7.1 +pylev==1.3.0 +pylint==2.5.3 +pymc3==3.8 +PyNaCl==1.4.0 +pynvml==8.0.4 +pyOpenSSL==19.1.0 pyparsing==2.4.7 +pyrsistent==0.16.0 pyshp==2.1.3 -pytest==6.2.2 -pytest-cov==2.11.1 +pytest==5.4.3 +pytest-cov==2.10.1 +pytest-forked==1.3.0 pytest-html==3.1.1 pytest-lazy-fixture==0.6.3 pytest-metadata==1.11.0 +pytest-runner==5.2 pytest-sugar==0.9.4 +pytest-xdist==1.34.0 +pytest-xprocess==0.13.1 python-dateutil==2.8.1 -pytz==2021.1 -PyYAML==5.4.1 -requests==2.25.1 +python-dotenv==0.10.3 +python-editor==1.0.4 +python-gflags==3.1.2 +python-json-logger==0.1.11 +python-jsonrpc-server==0.4.0 +python-lsp-jsonrpc==1.0.0 +python-lsp-server==1.1.0 +python-oauth2==1.1.1 +pythreejs==2.3.0 +pytz==2020.1 +pyunicore==0.9.9 +pyviz-comms==2.0.1 +PyWavelets==1.1.1 +PyYAML==5.3.1 +pyzmq==18.1.0 +rdflib==5.0.0 +recommonmark==0.6.0 +redis==3.5.3 +regex==2019.11.1 +requests==2.24.0 +requests-oauthlib==1.3.0 +requests-toolbelt==0.9.1 +requests-unixsocket==0.2.0 +retrying==1.3.3 +rise==5.7.1 +rope==0.16.0 +rsa==4.7.2 +Rtree==0.9.4 +ruamel.yaml==0.16.5 +ruamel.yaml.clib==0.1.2 +scandir==1.10.0 +scikit-build==0.11.1 +scikit-image==0.17.2 +scikit-learn==0.23.2 scipy==1.5.2 -seaborn==0.11.1 ---no-binary shapely Shapely==1.7.0 +seaborn==0.10.1 +SecretStorage==3.2.0 +selenium==3.141.0 +Send2Trash==1.5.0 +service-identity==18.1.0 +setuptools==47.1.0 +setuptools-scm==4.1.2 +Shapely==1.7.1 +shellingham==1.4.0 +sidecar==0.5.1 +simpervisor==0.4 +simplegeneric==0.8.1 +simplejson==3.17.2 +singledispatch==3.4.0.3 six==1.15.0 -statsmodels==0.12.2 +smmap2==2.0.5 +smopy==0.0.7 +sniffio==1.2.0 +snowballstemmer==2.0.0 +sortedcontainers==2.3.0 +SPARQLWrapper==1.8.5 +Sphinx==1.8.5 +sphinx-rtd-theme==0.4.3 +sphinxcontrib-websupport==1.1.2 +SQLAlchemy==1.3.18 +statsmodels==0.10.2 +sympy==1.6.1 tabulate==0.8.8 +tailer==0.4.1 +TatSu==5.5.0 +tblib==1.7.0 +tenacity==6.0.0 +tensorboard==2.5.0 +tensorboard-data-server==0.6.1 +tensorboard-plugin-profile==2.4.0 +tensorboard-plugin-wit==1.8.0 tensorflow==2.5.0 +tensorflow-estimator==2.5.0 termcolor==1.1.0 -toml==0.10.2 -toolz==0.11.1 -typing-extensions==3.7.4.3 -urllib3==1.26.3 -Werkzeug==1.0.1 +terminado==0.10.1 +testpath==0.4.4 +textwrap3==0.9.2 +Theano==1.0.4 +threadpoolctl==2.2.0 +tifffile==2020.10.1 +tikzplotlib==0.9.8 +toml==0.10.1 +tomlkit==0.7.0 +toolz==0.10.0 +tornado==6.1 +tornado-proxy-handlers==0.0.5 +tqdm==4.56.0 +traitlets==4.3.3 +traits==6.1.1 +traittypes==0.2.1 +Twisted==19.7.0 +txaio==18.8.1 +typed-ast==1.4.2 +typing-extensions==3.7.4 +ujson==3.2.0 +urllib3==1.25.10 +vcversioner==2.16.0.0 +vega-datasets==0.8.0 +version-information==1.0.3 +vincent==0.4.4 +virtualenv==20.4.6 +voila==0.2.10 +voila-gridstack==0.2.0 +voila-material==0.4.0 +voila-vuetify==0.5.2 +wcwidth==0.2.5 +webencodings==0.5.1 +websocket-client==1.1.0 +websockify==0.9.0 +Werkzeug==2.0.0 wget==3.2 +wheel==0.35.0 +widgetsnbextension==3.5.1 +wrapt==1.12.1 +wslink==0.1.13 xarray==0.16.2 +XlsxWriter==1.2.9 +yapf==0.28.0 +yarl==1.6.3 +zict==2.0.0 zipp==3.4.0 - -#Cartopy==0.18.0 +zope.interface==4.7.2 +zstandard==0.12.0