diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 7951b95cd86dd483facb17dcba7f79f4ff091fa2..de57ed9f7f814d512ea8cb941acf89bf822c8d7e 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -30,10 +30,10 @@ tests (from scratch): - base - zam347 stage: test - # only: - # - master - # - /^release.*$/ - # - develop + only: + - master + - /^release.*$/ + - develop variables: FAILURE_THRESHOLD: 100 TEST_TYPE: "scratch" @@ -41,6 +41,8 @@ tests (from scratch): - chmod +x ./CI/update_badge.sh - ./CI/update_badge.sh > /dev/null script: + - pip install --upgrade pip + - pip install numpy - zypper --non-interactive install binutils libproj-devel gdal-devel - zypper --non-interactive install proj geos-devel - cat requirements.txt | cut -f1 -d"#" | sed '/^\s*$/d' | xargs -L 1 pip install @@ -61,10 +63,10 @@ tests (on GPU): - gpu - zam347 stage: test - # only: - # - master - # - /^release.*$/ - # - develop + only: + - master + - /^release.*$/ + - develop variables: FAILURE_THRESHOLD: 100 TEST_TYPE: "gpu" diff --git a/HPC_setup/requirements_HDFML_additionals.txt b/HPC_setup/requirements_HDFML_additionals.txt index 82d78d096ba56157cf046c2e9e2064c3b68e421c..12e09ccdd620c0c81c78ae6d4781d4feb5b94baf 100644 --- a/HPC_setup/requirements_HDFML_additionals.txt +++ b/HPC_setup/requirements_HDFML_additionals.txt @@ -1,60 +1,63 @@ -absl-py==0.9.0 +absl-py==0.11.0 +appdirs==1.4.4 astor==0.8.1 -atomicwrites==1.3.0 -attrs==19.3.0 -certifi==2019.11.28 -chardet==3.0.4 -cloudpickle==1.3.0 -coverage==5.0.3 +attrs==20.3.0 +cached-property==1.5.2 +certifi==2020.12.5 +cftime==1.4.1 +chardet==4.0.0 +coverage==5.4 cycler==0.10.0 -Cython==0.29.15 -dask==2.11.0 -fsspec==0.6.2 -gast==0.3.3 -grpcio==1.27.2 +dask==2021.2.0 +fsspec==0.8.5 +gast==0.4.0 +grpcio==1.35.0 h5py==2.10.0 -idna==2.8 -importlib-metadata==1.5.0 +idna==2.10 +importlib-metadata==3.4.0 +iniconfig==1.1.1 -kiwisolver==1.1.0 -locket==0.2.0 -Markdown==3.2.1 -matplotlib==3.2.0 -mock==4.0.1 -more-itertools==8.2.0 -numpy==1.18.1 -packaging==20.3 -pandas==1.0.1 +kiwisolver==1.3.1 +locket==0.2.1 +Markdown==3.3.3 +matplotlib==3.3.4 +mock==4.0.3 +netCDF4==1.5.5.1 +numpy==1.19.5 +ordered-set==4.0.2 +packaging==20.9 +pandas==1.1.5 partd==1.1.0 patsy==0.5.1 -Pillow==7.0.0 +Pillow==8.1.0 pluggy==0.13.1 -protobuf==3.11.3 -py==1.8.1 -pydot==1.4.1 -pyparsing==2.4.6 -pyproj==2.5.0 -pyshp==2.1.0 -pytest==5.3.5 -pytest-cov==2.8.1 -pytest-html==2.0.1 +protobuf==3.15.0 +py==1.10.0 +pydot==1.4.2 +pyparsing==2.4.7 +pyshp==2.1.3 +pytest==6.2.2 +pytest-cov==2.11.1 +pytest-html==3.1.1 pytest-lazy-fixture==0.6.3 -pytest-metadata==1.8.0 +pytest-metadata==1.11.0 pytest-sugar python-dateutil==2.8.1 -pytz==2019.3 -PyYAML==5.3 -requests==2.23.0 -scipy==1.4.1 -seaborn==0.10.0 +pytz==2021.1 +PyYAML==5.4.1 +requests==2.25.1 +scipy==1.5.4 +seaborn==0.11.1 --no-binary shapely Shapely==1.7.0 -six==1.11.0 -statsmodels==0.11.1 -tabulate -toolz==0.10.0 -typing-extensions -urllib3==1.25.8 -wcwidth==0.1.8 -Werkzeug==1.0.0 -xarray==0.15.0 -zipp==3.1.0 +six==1.15.0 +statsmodels==0.12.2 +tabulate==0.8.8 +termcolor==1.1.0 +toml==0.10.2 +toolz==0.11.1 +typing-extensions==3.7.4.3 +urllib3==1.26.3 +Werkzeug==1.0.1 +wget==3.2 +xarray==0.16.2 +zipp==3.4.0 diff --git a/HPC_setup/requirements_JUWELS_additionals.txt b/HPC_setup/requirements_JUWELS_additionals.txt index 82d78d096ba56157cf046c2e9e2064c3b68e421c..12e09ccdd620c0c81c78ae6d4781d4feb5b94baf 100644 --- a/HPC_setup/requirements_JUWELS_additionals.txt +++ b/HPC_setup/requirements_JUWELS_additionals.txt @@ -1,60 +1,63 @@ -absl-py==0.9.0 +absl-py==0.11.0 +appdirs==1.4.4 astor==0.8.1 -atomicwrites==1.3.0 -attrs==19.3.0 -certifi==2019.11.28 -chardet==3.0.4 -cloudpickle==1.3.0 -coverage==5.0.3 +attrs==20.3.0 +cached-property==1.5.2 +certifi==2020.12.5 +cftime==1.4.1 +chardet==4.0.0 +coverage==5.4 cycler==0.10.0 -Cython==0.29.15 -dask==2.11.0 -fsspec==0.6.2 -gast==0.3.3 -grpcio==1.27.2 +dask==2021.2.0 +fsspec==0.8.5 +gast==0.4.0 +grpcio==1.35.0 h5py==2.10.0 -idna==2.8 -importlib-metadata==1.5.0 +idna==2.10 +importlib-metadata==3.4.0 +iniconfig==1.1.1 -kiwisolver==1.1.0 -locket==0.2.0 -Markdown==3.2.1 -matplotlib==3.2.0 -mock==4.0.1 -more-itertools==8.2.0 -numpy==1.18.1 -packaging==20.3 -pandas==1.0.1 +kiwisolver==1.3.1 +locket==0.2.1 +Markdown==3.3.3 +matplotlib==3.3.4 +mock==4.0.3 +netCDF4==1.5.5.1 +numpy==1.19.5 +ordered-set==4.0.2 +packaging==20.9 +pandas==1.1.5 partd==1.1.0 patsy==0.5.1 -Pillow==7.0.0 +Pillow==8.1.0 pluggy==0.13.1 -protobuf==3.11.3 -py==1.8.1 -pydot==1.4.1 -pyparsing==2.4.6 -pyproj==2.5.0 -pyshp==2.1.0 -pytest==5.3.5 -pytest-cov==2.8.1 -pytest-html==2.0.1 +protobuf==3.15.0 +py==1.10.0 +pydot==1.4.2 +pyparsing==2.4.7 +pyshp==2.1.3 +pytest==6.2.2 +pytest-cov==2.11.1 +pytest-html==3.1.1 pytest-lazy-fixture==0.6.3 -pytest-metadata==1.8.0 +pytest-metadata==1.11.0 pytest-sugar python-dateutil==2.8.1 -pytz==2019.3 -PyYAML==5.3 -requests==2.23.0 -scipy==1.4.1 -seaborn==0.10.0 +pytz==2021.1 +PyYAML==5.4.1 +requests==2.25.1 +scipy==1.5.4 +seaborn==0.11.1 --no-binary shapely Shapely==1.7.0 -six==1.11.0 -statsmodels==0.11.1 -tabulate -toolz==0.10.0 -typing-extensions -urllib3==1.25.8 -wcwidth==0.1.8 -Werkzeug==1.0.0 -xarray==0.15.0 -zipp==3.1.0 +six==1.15.0 +statsmodels==0.12.2 +tabulate==0.8.8 +termcolor==1.1.0 +toml==0.10.2 +toolz==0.11.1 +typing-extensions==3.7.4.3 +urllib3==1.26.3 +Werkzeug==1.0.1 +wget==3.2 +xarray==0.16.2 +zipp==3.4.0