From f5219ca39bf4632a87535b56b6557207e9ffb736 Mon Sep 17 00:00:00 2001 From: Felix Kleinert <f.kleinert@fz-juelich.de> Date: Sun, 11 Apr 2021 09:11:31 +0200 Subject: [PATCH] UPDATE HPC REQ FOR WRDFH --- HPC_setup/mlt_modules_hdfml.sh | 3 ++- HPC_setup/setup_venv_hdfml.sh | 1 + HPC_setup/setup_venv_juwels.sh | 1 + 3 files changed, 4 insertions(+), 1 deletion(-) diff --git a/HPC_setup/mlt_modules_hdfml.sh b/HPC_setup/mlt_modules_hdfml.sh index 0ecbc13f..d9900009 100644 --- a/HPC_setup/mlt_modules_hdfml.sh +++ b/HPC_setup/mlt_modules_hdfml.sh @@ -14,7 +14,8 @@ ml Python/3.6.8 ml TensorFlow/1.13.1-GPU-Python-3.6.8 ml Keras/2.2.4-GPU-Python-3.6.8 ml SciPy-Stack/2019a-Python-3.6.8 -ml dask/1.1.5-Python-3.6.8 +# ml dask/1.1.5-Python-3.6.8 +ml dask/2.12.0-Python-3.6.8 ml GEOS/3.7.1-Python-3.6.8 ml Graphviz/2.40.1 diff --git a/HPC_setup/setup_venv_hdfml.sh b/HPC_setup/setup_venv_hdfml.sh index ad5b1276..cc3156b0 100644 --- a/HPC_setup/setup_venv_hdfml.sh +++ b/HPC_setup/setup_venv_hdfml.sh @@ -38,3 +38,4 @@ export HDF5_MPI="ON" pip install --no-binary=h5py h5py pip install --ignore-installed netcdf4==1.5.4 +python -m pip install "dask[complete]" diff --git a/HPC_setup/setup_venv_juwels.sh b/HPC_setup/setup_venv_juwels.sh index 7788c124..b33a0baf 100755 --- a/HPC_setup/setup_venv_juwels.sh +++ b/HPC_setup/setup_venv_juwels.sh @@ -35,4 +35,5 @@ pip install --ignore-installed matplotlib==3.2.0 pip install --ignore-installed pandas==1.0.1 pip install -U typing_extensions +python -m pip install --ignore-installed "dask[complete]==2021.3.0" # Comment: Maybe we have to export PYTHONPATH a second time ater activating the venv (after job allocation) -- GitLab