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-# Project: Analysing the performance of AlphaFold3 for RNA structure prediction 
+# Project: Analysing AlphaFold3 for RNA structure prediction 
+The goal of this project was to investigate how well Alphafold3 can predict the structure of RNAs that were not part of the training set. To do this, I focused on analyzing the RMSD, RMSD per residue, and structural motifs of the RNA structure predictions of a test set of new RNA structures deposited on PDB databank since 2023. 
+
 
 ## alphafold_structures
 Directory contains all structure predictions made with AlphaFold3 for different datasets and additionally the pdb files from the experimental structure deposited on PDB.
 
+
 ## analysis
 Analysis directory contains all .ipynb evaluation files. 
 
+
 ## data_22
 Output from NucleoSeeker for all RNA structures before 2022 from PDB.
 
+
 ## data_23_24
 Output from NucleoSeeker for all RNA structures from 2023 until October 2024 from PDB.
 
+
 ## rna_only_23_24 
 Similar to data_23_24 but with additional filtering for RNA only. This directory contains only RNA that is deposited as isolated RNA structure in PDB.
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