From 269ded9a406331ecf539600889dba3e1641d6d59 Mon Sep 17 00:00:00 2001 From: "c.faber" <c.faber@fz-juelich.de> Date: Fri, 18 Oct 2024 13:24:46 +0200 Subject: [PATCH] equation --- src/BioHelpers_FABER/rmsd.py | 1 + 1 file changed, 1 insertion(+) diff --git a/src/BioHelpers_FABER/rmsd.py b/src/BioHelpers_FABER/rmsd.py index ab2be87..d0d6ed5 100644 --- a/src/BioHelpers_FABER/rmsd.py +++ b/src/BioHelpers_FABER/rmsd.py @@ -101,6 +101,7 @@ def rmsd_from_rot_tran( ) -> float: """Calculate an RMSD like value for a given set of vectors x and y with a given rotation matrix and translation vector Mathematical formula: + .. math:: \mathrm{RMSD} = \frac{1}{M} \sum_{k=1..M} |\mathfrak{U}\mathbf{x} + \mathbf{r} - \mathbf{y}|^2 **Important Note:** The translation vector differs from Kabsch algorithm, there you translate befor rotating. In Coutsias paper it is the otherway round. -- GitLab