diff --git a/src/add_rki_to_map.py b/src/add_rki_to_map.py deleted file mode 100644 index 4a6a11318b4b6f6f2a165bdde6f3b6b75653cae9..0000000000000000000000000000000000000000 --- a/src/add_rki_to_map.py +++ /dev/null @@ -1,34 +0,0 @@ -import os -import pickle as pkl -import pandas as pd - -data = pd.read_csv('../data/diseases/covid19.csv', sep=',', encoding='iso-8859-1', index_col=0) -data.index = [pd.Timestamp(date) for date in data.index] - -with open('../data/counties/counties.pkl', 'rb') as f: - counties = pkl.load(f) - -shared_assets = '/p/project/covid19dynstat/shared_assets/' -figures = os.path.join(shared_assets, 'figures/') -dates = next(os.walk(figures))[1] - -# errors if the RKI based csv is out of date with the available folders -for date in dates: - map_csv_path = os.path.join(figures, date, 'map.csv') - - map_rki = data.loc[date.replace('_', '-')].values.astype('float64') - for (i, (key, _)) in enumerate(counties.items()): - n_people = counties[key]['demographics'][('total', 2018)] - map_rki[i] = map_rki[i] / n_people * 100000 - - map_data = pd.read_csv(map_csv_path, index_col=0) - map_data["newInf100k_RKI"] = list(map_rki) - - - - - - - - -