dicom-upload

Upload DICOM files with patient und study data removed from header

Installation

To install use pip:

$ pip install dicom_upload
$ jupyter nbextension enable --py --sys-prefix dicom_upload

Alternatively, install directly from GitLab:

$ pip install git+https://gitlab.version.fz-juelich.de/jupyter4jsc/j4j_extras/dicom-upload.git

To install for jupyterlab

$ jupyter labextension install dicom_upload

For a development installation (requires npm),

$ git clone https://gitlab.version.fz-juelich.de/jupyter4jsc/j4j_extras/dicom-upload.git
$ cd dicom-upload
$ pip install -e .
$ jupyter nbextension install --py --symlink --sys-prefix dicom_upload
$ jupyter nbextension enable --py --sys-prefix dicom_upload
$ jupyter labextension install js

When actively developing your extension, build Jupyter Lab with the command:

$ jupyter lab --watch

This take a minute or so to get started, but then allows you to hot-reload your javascript extension. To see a change, save your javascript, watch the terminal for an update.

Note on first jupyter lab --watch, you may need to touch a file to get Jupyter Lab to open.