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Commit 178639be authored by Stefan Kesselheim's avatar Stefan Kesselheim
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Update README.md

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...@@ -8,7 +8,7 @@ It is composed of the following steps: ...@@ -8,7 +8,7 @@ It is composed of the following steps:
3. Export the docker container for singularity. (Does this work on WSL?) 3. Export the docker container for singularity. (Does this work on WSL?)
4. Recreate the environment on the supercomputers 4. Recreate the environment on the supercomputers
#Install docker # Install docker
This step depends on the OS you use. Please follow the instructions on the [docker web page](https://docs.docker.com/get-docker/). After that you should be able to This step depends on the OS you use. Please follow the instructions on the [docker web page](https://docs.docker.com/get-docker/). After that you should be able to
start a simple docker container: start a simple docker container:
```bash ```bash
...@@ -56,7 +56,7 @@ the script `run_command_in_container.sh`. If you execute ...@@ -56,7 +56,7 @@ the script `run_command_in_container.sh`. If you execute
``` ```
you will see which python version has been installed into the container. you will see which python version has been installed into the container.
#Export the docker container for singularity # Export the docker container for singularity
In this step, you will export the docker image you have created as a singularity container. It requires the following steps: In this step, you will export the docker image you have created as a singularity container. It requires the following steps:
1. Save the docker image in a tarball 1. Save the docker image in a tarball
```bash ```bash
...@@ -76,7 +76,7 @@ singularity build singularity_docker_jupyter.sif docker-archive://singularity_do ...@@ -76,7 +76,7 @@ singularity build singularity_docker_jupyter.sif docker-archive://singularity_do
If you local machine is a Linux machine, you also have the option to create the singularity image `singularity_docker_jupyter.sif` on your local machine. If you local machine is a Linux machine, you also have the option to create the singularity image `singularity_docker_jupyter.sif` on your local machine.
#Use the container with singularity on the supercomputer # Use the container with singularity on the supercomputer
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