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## Helmholtz AI COVIDNet X Initiative
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#### Transferable Deep Learning for explainable COVID X-Ray detection and diagnostics
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### Transferable Deep Learning for explainable COVID X-Ray detection and diagnostics
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Author: Jenia Jitsev (JJ)
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(Helmholtz AI Local "Information", Juelich Supercomputing Center (JSC))
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Further Contributors: Mehdi Cherti (MC) (Helmholtz AI HLST, JSC)
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Further Contributors: Mehdi Cherti (MC) (Helmholtz AI HLST, JSC)
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#### Project Overview
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#### Initiative Overview
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* [Description of available models, codes and datasets](https://gitlab.version.fz-juelich.de/MLDL_FZJ/juhaicu/jsc_public/sharedspace/playground/covid_xray_deeplearning/wiki/-/blob/master/Description.md)
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* For the experiments and model training, **computing budget is available**, on JSC's JUSUF machine (up to 61 nodes with 1x V100 GPU)
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* For model training and further experiments, **computing budget is available**, on JSC's JUSUF machine (up to 61 nodes with 1x V100 GPU)
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- [JUSUF Hardware Specs in detail](https://www.fz-juelich.de/ias/jsc/EN/Expertise/Supercomputers/JUSUF/Configuration/Configuration_node.html)
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- Budget limited until 31.10.2020 for initial project phase
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- Computational time project will be continued after successful initial phase
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- For collaboration and access to computing resources, please contact Jenia Jitsev (j.jitsev@fz-juelich.de), Mehdi Cherti (m.cherti@fz-juelich.de), or Alex Strube (a.strube@fz-juelich.de)
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- Collaborating partners will also gain access to common code and dataset repository
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* Projects aims are:
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* Initiative's aims are:
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- short-term: provide **strong baseline** for pre-training and **transfer learning** for COVID X-Ray diagnostics using large-scale datasets of images from different domains (using both generic datasets like ImageNet and medical imaging datasets like COVIDx - see [Description of available models, codes and datasets](https://gitlab.version.fz-juelich.de/MLDL_FZJ/juhaicu/jsc_public/sharedspace/playground/covid_xray_deeplearning/wiki/-/blob/master/Description.md))
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- **indicate** for the public users (medical doctors, etc) how **certain / uncertain** the performed classification is, given images provided by the users
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- **indicate** for the users on which basis the classification was made. e.g by highlighting regions of the input X-Ray image by a heat map or visualizing receptive fields of responsible activations across layers showing which **image regions** or **intermediate features** are **essential for diagnostics decision**
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