Refactor

added 2020-05-13 label

added 23 commits

2ba3adae...82fd5783 - 22 commits from branch master
0612f835 - Merge branch 'master' into 'refactor'

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Widened the scope of the pull request:

At the end it should be the first release candidate suitable for public release

Required things:

finalized refactoring
- C++ style names in the C++ part of the code
- functions where required for testing basic functionality
- removal of redundant code
- move definitions into the class definition
- more complete Doxygen inline documentation
- compiles with Werror (without voro++, which fails in that regard!)
automated documentation with Sphinx
revised readme
more complete unit tests
functionality test (basic, to check if the results make sense)
add other runners to provide tests for other compilers (intel / pgi / ...?)

added 1 commit

d68a97f3 - fixed merge conflicts

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added 1 commit

f631bcd2 - start doxygen documentation and

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added 1 commit

f52fff15 - add doxygen to ALL_LB.hpp and changes

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assigned to @schulz3 and unassigned @halver1

assigned to @halver1 and unassigned @schulz3

added 1 commit

a2da5587 - documentation and fix in ALL.hpp (l 584)

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added 1 commit

f303f684 - testing fix for MPI_Comm_split error

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added 1 commit

063f8ba2 - fixing the last commit

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added 31 commits

f96cf912 - add rank to VTK outlines output
d232542d - add also set local id for grid (breaks API!)
3cfed105 - also output id in VTK outlines
df7b1b42 - Merge branch 'feature/rank-in-output' into personal/schulz3/gmpm-poc
b3e35c2d - update fortran interface with new set_prog_grid_parms
6ead9066 - only require actually used components of VTK
3e224399 - Merge branch 'master' into personal/schulz3/gmpm-poc
f19cbc7a - use all lowercase C functions for less repetition in new Fortran interface
0b1e8389 - fix Fortran example for new vertex scheme
91a8232e - add simple gitignore with VIM swap files
0736ab75 - use mpi module, include file not Fortran 2003 compatible on OpenMPI 4
eb559d04 - do not modify n of get_vertices and get_prev_vertices
3a2b9c9f - add initial new interface, temporarily called ALL_module_obj, only external interface for now
00c8e7b6 - enable CMAKE_ALL_USE_F08
065c1405 - first version of object oriented Fortran interface, with less redundancy in API
960707d1 - update/new Fortran example
e9119d67 - enable rank and tag output, set with set_proc_tag
4ea05da4 - vtkIntArray.h not included
9b354f6e - Merge remote-tracking branch 'origin/feature/modern_fortran_interface' into...
e8cd4996 - Merge remote-tracking branch 'origin/feature/modern_fortran_interface' into...
b6e5669a - fix actual conflicts
92bd0d55 - fix correct dummy argument sequence for set_proc_grid_params
4a547dfb - fix correct dummy argument sequence for set_proc_grid_params
15979cc9 - Merge remote-tracking branch 'origin/feature/modern_fortran_interface' into...
f2c6d2fc - Merge remote-tracking branch 'origin/refactor' into personal/schulz3/gmpm-poc
ff960b61 - Merge remote-tracking branch 'origin/refactor' into personal/schulz3/gmpm-poc
7372b9c2 - Merge remote-tracking branch 'origin/refactor' into personal/schulz3/gmpm-poc
2ea321e7 - update interface
86fec05c - document fortran module a bit
384376db - object oriented and normal fortran interface in one module
359e89a1 - Merge branch 'personal/schulz3/gmpm-poc' into refactor

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I updated the Fortran interface and private C interface. There is now only one Fortran module which contains both, the object oriented interface and the function oriented one. If desired, the object oriented one can be removed by commenting a few lines. But they should not clash as far as I can see.