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DEEP-SEA
easybuild-repository-public-release
Commits
53c2b8b6
Commit
53c2b8b6
authored
4 years ago
by
Sebastian Lührs
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add mpi4py and h5py for npsmpic toolchain
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5059f5a9
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Golden_Repo/h/h5py/h5py-2.10.0-npsmpic-2020-Python-3.8.5.eb
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Golden_Repo/h/h5py/h5py-2.10.0-npsmpic-2020-Python-3.8.5.eb
Golden_Repo/m/mpi4py/mpi4py-3.0.3-npsmpic-2020-Python-3.8.5.eb
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...n_Repo/m/mpi4py/mpi4py-3.0.3-npsmpic-2020-Python-3.8.5.eb
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Golden_Repo/h/h5py/h5py-2.10.0-npsmpic-2020-Python-3.8.5.eb
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easyblock = "PythonPackage"
name = 'h5py'
version = '2.10.0'
versionsuffix = '-Python-%(pyver)s'
homepage = 'http://www.h5py.org/'
description = """HDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library,
version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous
amounts of data.
"""
site_contacts = 's.luehrs@fz-juelich.de'
toolchain = {'name': 'npsmpic', 'version': '2020'}
toolchainopts = {'usempi': True}
source_urls = [PYPI_SOURCE]
sources = [SOURCE_TAR_GZ]
req_py_majver = 3
req_py_minver = 0
# to really use mpi enabled hdf5 we now seem to need a configure step
prebuildopts = 'export LDSHARED="$CC -shared" && export CFLAGS="-noswitcherror -D_NPY_NO_DEPRECATIONS" && '
prebuildopts += 'python setup.py configure --mpi --hdf5=$EBROOTHDF5 && '
builddependencies = [
('pkgconfig', '1.5.1', versionsuffix),
]
dependencies = [
('Python', '3.8.5'),
('SciPy-Stack', '2020', versionsuffix, ('gcccoremkl', '9.3.0-2020.2.254')), # numpy required
('mpi4py', '3.0.3', versionsuffix), # required for MPI support
('HDF5', '1.10.6'),
]
sanity_check_paths = {
'files': [],
'dirs': ['lib/python%(pyshortver)s/site-packages/'],
}
moduleclass = 'data'
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Golden_Repo/m/mpi4py/mpi4py-3.0.3-npsmpic-2020-Python-3.8.5.eb
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easyblock = 'PythonPackage'
name = 'mpi4py'
version = '3.0.3'
homepage = 'https://bitbucket.org/mpi4py/mpi4py'
description = """MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for
the Python programming language, allowing any Python program to exploit multiple processors.
"""
site_contacts = 'a.kreuzer@fz-juelich.de'
toolchain = {'name': 'npsmpic', 'version': '2020'}
source_urls = [BITBUCKET_DOWNLOADS]
sources = [SOURCE_TAR_GZ]
versionsuffix = '-Python-%(pyver)s'
dependencies = [('Python', '3.8.5')]
prebuildopts = 'CFLAGS=-noswitcherror'
sanity_check_paths = {
'files': [],
'dirs': ['lib/python%(pyshortver)s/site-packages/mpi4py'],
}
moduleclass = 'mpi'
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