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Commit 608fbb89 authored by Jens Henrik Göbbert's avatar Jens Henrik Göbbert
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Merge branch '2023' into Jupyter

parents a80ab001 22684c22
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Golden_Repo/c/cppzmq/cppzmq-4.9.0-GCCcore-11.3.0.eb 0 → 100644
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# ll4strw Lorentz Institute
easyblock = 'CMakeMake'
name = 'cppzmq'
version = '4.9.0'
homepage = 'https://github.com/zeromq/cppzmq'
description = "cppzmq is a C++ binding for libzmq."
toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
toolchainopts = {'pic': True}
source_urls = ['https://github.com/zeromq/%(name)s/archive/refs/tags/']
sources = ['v%(version)s.tar.gz']
checksums = ['3fdf5b100206953f674c94d40599bdb3ea255244dcc42fab0d75855ee3645581']
builddependencies = [
('binutils', '2.38'),
('CMake', '3.23.1'),
('ZeroMQ', '4.3.4'),
]
separate_build_dir = True
sanity_check_paths = {
'files': ['include/zmq.hpp'],
'dirs': ['include', 'lib'],
}
moduleclass = 'lib'
Golden_Repo/hidden_deps.txt
+ 1
− 0
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...@@ -56,6 +56,7 @@ JupyterKernel-Bash ...@@ -56,6 +56,7 @@ JupyterKernel-Bash
JupyterKernel-Cling JupyterKernel-Cling
JupyterKernel-JavaScript JupyterKernel-JavaScript
JupyterKernel-Julia JupyterKernel-Julia
JupyterKernel-LFortran
JupyterKernel-Octave JupyterKernel-Octave
JupyterKernel-PyDeepLearning JupyterKernel-PyDeepLearning
JupyterKernel-PyParaView JupyterKernel-PyParaView
......
Golden_Repo/j/JupyterKernel-LFortran/JupyterKernel-LFortran-0.19.0-GCCcore-11.3.0-2023.3.6.eb 0 → 100644
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easyblock = 'Bundle'
name = 'JupyterKernel-LFortran'
version = '0.19.0'
local_jupyterver = '2023.3.6'
versionsuffix = '-' + local_jupyterver
homepage = 'https://lfortran.org'
description = """LFortran is a modern open-source (BSD licensed)
interactive Fortran compiler built on top of LLVM.
"""
toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
toolchainopts = {'pic': True}
builddependencies = [
('binutils', '2.38'),
('lfortran', version),
]
dependencies = [
('JupyterLab', local_jupyterver),
]
components = [
('logos', '1.0', {
'easyblock': 'Binary',
'sources': [
{'filename': 'logo-32x32.png.base64', 'extract_cmd': "base64 -d %s > %%(builddir)s/logo-32x32.png"},
{'filename': 'logo-64x64.png.base64', 'extract_cmd': "base64 -d %s > %%(builddir)s/logo-64x64.png"},
{'filename': 'logo-128x128.png.base64', 'extract_cmd': "base64 -d %s > %%(builddir)s/logo-128x128.png"},
],
'checksums': [
'd162d9812aaf7d4714e45613db327da31dcba2110fe81d88a070f1530bcd3ac2', # logo-32x32.png.base64
'268ef2bfe4fb722190c43f0b84b36f6ace176914abb0c62f920390251cb86527', # logo-64x64.png.base64
'2b999729524a16a31fb2b623b6e02a7b8e9dd502145d92ca1fd7ce6feedfbafe', # logo-128x128.png.base64
],
}),
]
local_jupyter_path = 'share/jupyter'
modextrapaths = {
'JUPYTER_PATH': ['share/jupyter'], # add search path for kernelspecs
}
local_kernel_dir = 'lfortran'
local_kernel_name = 'LFortran-%s' % version
# Ensure that the user-specific $HOME/.local/share/jupyter is always first entry in JUPYTHER_PATH
modluafooter = """
prepend_path("JUPYTER_PATH", pathJoin(os.getenv("HOME"), ".local/share/jupyter"))
"""
postinstallcmds = [
# create kernel skeleton
(
'mkdir -p %%(installdir)s/share/jupyter/kernels/%s && '
'mv %%(installdir)s/logo-32x32.png %%(installdir)s/share/jupyter/kernels/%s/logo-32x32.png && '
'mv %%(installdir)s/logo-64x64.png %%(installdir)s/share/jupyter/kernels/%s/logo-64x64.png && '
'mv %%(installdir)s/logo-128x128.png %%(installdir)s/share/jupyter/kernels/%s/logo-128x128.png'
) % (local_kernel_dir, local_kernel_dir, local_kernel_dir, local_kernel_dir),
# write kernel.sh
(
'{ cat > %%(installdir)s/share/jupyter/kernels/%s/kernel.sh; } << EOF\n'
'#!/bin/bash \n'
'\n'
'# Load required modules \n'
'module load Stages/${STAGE} \n'
'module load GCCcore/.11.3.0 \n'
'module load %s/.%s%s \n'
'\n'
'module load lfortran/%s \n'
'\n'
'exec lfortran \$@\n'
'\n'
'EOF'
) % (local_kernel_dir, name, version, versionsuffix, version),
'chmod +x %%(installdir)s/share/jupyter/kernels/%s/kernel.sh' % local_kernel_dir,
# Jupyter Kernel: LFortan
(
'{ cat > %%(installdir)s/share/jupyter/kernels/%s/kernel.json; } << EOF\n'
'{\n'
' "argv": [\n'
' "%%(installdir)s/share/jupyter/kernels/%s/kernel.sh", \n'
' "kernel",\n'
' "-f",\n'
' "{connection_file}"\n'
' ],\n'
' "display_name": "%s", \n'
' "language": "fortran",\n'
' "name": "%s"\n'
'}\n'
'EOF'
) % (local_kernel_dir, local_kernel_dir, local_kernel_name, local_kernel_name),
]
sanity_check_paths = {
'files': [
'share/jupyter/kernels/lfortran/kernel.json',
],
'dirs': [
'share/jupyter/kernels/lfortran/',
],
}
moduleclass = 'tools'
Golden_Repo/j/JupyterKernel-LFortran/logo-128x128.png.base64 0 → 100644
+ 104
− 0
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View file @ 608fbb89
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Golden_Repo/l/lfortran/lfortran-0.19.0-GCCcore-11.3.0.eb 0 → 100644
+ 56
− 0
View file @ 608fbb89
easyblock = 'CMakeMake'
name = 'lfortran'
version = '0.19.0'
homepage = 'https://lfortran.org'
description = """LFortran is a modern open-source (BSD licensed)
interactive Fortran compiler built on top of LLVM.
"""
toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
toolchainopts = {'pic': True}
github_account = 'lfortran'
source_urls = [GITHUB_SOURCE]
sources = ['v%(version)s.tar.gz']
patches = ['setversion.patch']
checksums = [
{'v0.19.0.tar.gz': 'd4aa69bfaecaee4523887a1747d565fb577c6c9f3663d15c86a29de3e7e87685'},
{'setversion.patch': '6fcd6f961c2b6dc65ca167d1d5347d1ac3773d7f1fb4ee96911a5ad4f8bf9c3d'}
]
builddependencies = [
('binutils', '2.38'),
('CMake', '3.23.1'),
('Python', '3.10.4'),
('pkgconf', '1.8.0'),
('re2c', '2.2'),
]
dependencies = [
('LLVM', '14.0.3'),
('xeus-zmq', '1.1.0'),
]
separate_build_dir = True
preconfigopts = (
'pushd %(builddir)s/lfortran-%(version)s/ && '
'./build0.sh %(version)s && '
'popd && '
)
configopts = "-DCMAKE_VERBOSE_MAKEFILE=ON "
configopts += "-DWITH_LLVM=yes "
configopts += "-DWITH_XEUS=yes "
sanity_check_paths = {
'files': [
'bin/lfortran',
'share/lfortran/lib/liblfortran_runtime.so',
],
'dirs': ['bin', 'share']
}
moduleclass = 'tools'
Golden_Repo/l/lfortran/setversion.patch 0 → 100644
+ 12
− 0
View file @ 608fbb89
diff -Naur lfortran-0.19.0.orig/build0.sh lfortran-0.19.0/build0.sh
--- lfortran-0.19.0.orig/build0.sh 2023-04-28 20:42:00.000000000 +0200
+++ lfortran-0.19.0/build0.sh 2023-07-11 14:25:20.573477541 +0200
@@ -4,7 +4,7 @@
set -x
# Generate the `version` file
-ci/version.sh
+echo $1 > version
# Generate a Fortran AST from AST.asdl (C++)
python src/libasr/asdl_cpp.py grammar/AST.asdl src/lfortran/ast.h
Golden_Repo/x/xeus-zmq/xeus-zmq-1.1.0-GCCcore-11.3.0.eb 0 → 100644
+ 40
− 0
View file @ 608fbb89
easyblock = 'CMakeMake'
name = 'xeus-zmq'
version = '1.1.0'
homepage = 'https://github.com/jupyter-xeus/xeus-zmq'
description = """ZeroMQ-based middleware for xeus
"""
toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
toolchainopts = {'pic': True}
github_account = 'jupyter-xeus'
source_urls = [GITHUB_SOURCE]
sources = ['%(version)s.tar.gz']
checksums = [
{'1.1.0.tar.gz': 'd83db4f003349abfd11fcbf4ffdc91ebafb6c01bb36a950f94f09e5704d3d8dd'},
]
builddependencies = [
('CMake', '3.23.1'),
]
dependencies = [
('Python', '3.10.4'),
('xeus', '3.1.1'),
]
separate_build_dir = True
configopts = "-DCMAKE_VERBOSE_MAKEFILE=ON "
sanity_check_paths = {
'files': [
'lib/libxeus-zmq.so'
],
'dirs': ['include', 'lib']
}
moduleclass = 'tools'
Golden_Repo/x/xeus/xeus-3.1.1-GCCcore-11.3.0.eb 0 → 100644
+ 44
− 0
View file @ 608fbb89
easyblock = 'CMakeMake'
name = 'xeus'
version = '3.1.1'
homepage = 'https://www.olcf.ornl.gov/center-projects/adios/'
description = """Implementation of the Jupyter kernel protocol in C++
"""
toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
toolchainopts = {'pic': True}
github_account = 'jupyter-xeus'
source_urls = [GITHUB_SOURCE]
sources = ['%(version)s.tar.gz']
checksums = [
{'3.1.1.tar.gz': '5bf07600dc43c1790fbacd3fb5e148b1bf3022211a30e28f6955382aff76e06a'},
]
builddependencies = [
('CMake', '3.23.1'),
]
dependencies = [
('Python', '3.10.4'),
('OpenSSL', '1.1', '', True),
('ZeroMQ', '4.3.4'),
('nlohmann_json', '3.10.5'),
('cppzmq', '4.9.0'),
('xtensor', '0.24.6'),
]
separate_build_dir = True
configopts = "-DCMAKE_VERBOSE_MAKEFILE=ON "
sanity_check_paths = {
'files': [
'lib/libxeus.so'
],
'dirs': ['include', 'lib']
}
moduleclass = 'tools'
Golden_Repo/x/xtensor/xtensor-0.24.6-GCCcore-11.3.0.eb 0 → 100644
+ 49
− 0
View file @ 608fbb89
easyblock = 'Bundle'
name = 'xtensor'
version = '0.24.6'
homepage = 'https://github.com/xtensor-stack/xtensor'
description = "xtensor is a C++ library meant for numerical analysis with multi-dimensional array expressions."
toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
builddependencies = [
('CMake', '3.23.1'),
('pkgconf', '1.8.0'),
('pybind11', '2.9.2'),
]
dependencies = [
('Python', '3.10.4'),
('SciPy-bundle', '2022.05', '', ('gcccoremkl', '11.3.0-2022.1.0')),
]
default_easyblock = 'CMakeMake'
default_component_specs = {
'source_urls': ['https://github.com/xtensor-stack/%(name)s/archive/'],
'sources': ['%(version)s.tar.gz'],
'start_dir': '%(name)s-%(version)s',
}
components = [
('xtl', '0.7.5', {
'checksums': ['3286fef5fee5d58f82f7b91375cd449c819848584bae9367893501114d923cbe'],
}),
('xsimd', '11.1.0', {
'checksums': ['aa54dba8daade472656eba0d27154f072fec06ee3831aefcac69a5f6c7dbbae7'],
}),
('xtensor', version, {
'checksums': ['f87259b51aabafdd1183947747edfff4cff75d55375334f2e81cee6dc68ef655'],
}),
('xtensor-python', '0.26.1', {
'checksums': ['eb64155c6824be471decf93927beedae3645714c8ce92f38e037434db2c2454a'],
}),
]
sanity_check_paths = {
'files': ['include/xtensor.hpp', 'lib/pkgconfig/xsimd.pc'],
'dirs': ['include/xsimd', 'include/xtensor', 'include/xtensor-python', 'include/xtl', 'lib/cmake'],
}
moduleclass = 'lib'
acls.yml
+ 18
− 0
View file @ 608fbb89
...@@ -95,6 +95,9 @@ software: ...@@ -95,6 +95,9 @@ software:
- name: 'Colmap' - name: 'Colmap'
owner: 'goebbert1' owner: 'goebbert1'
base: True base: True
- name: 'cppzmq'
owner: 'goebbert1'
base: True
- name: 'CVXOPT' - name: 'CVXOPT'
owner: 'goebbert1' owner: 'goebbert1'
mpi: True mpi: True
...@@ -196,6 +199,9 @@ software: ...@@ -196,6 +199,9 @@ software:
- name: 'JupyterKernel-Julia' - name: 'JupyterKernel-Julia'
owner: 'goebbert1' owner: 'goebbert1'
base: True base: True
- name: 'JupyterKernel-LFortran'
owner: 'goebbert1'
base: True
- name: 'JupyterKernel-Octave' - name: 'JupyterKernel-Octave'
owner: 'goebbert1' owner: 'goebbert1'
base: True base: True
...@@ -226,6 +232,9 @@ software: ...@@ -226,6 +232,9 @@ software:
- name: 'JupyterProxy-Matlab' - name: 'JupyterProxy-Matlab'
owner: 'goebbert1' owner: 'goebbert1'
base: True base: True
- name: 'lfortran'
owner: 'goebbert1'
base: True
- name: 'libaec' - name: 'libaec'
owner: 'griessbach1' owner: 'griessbach1'
base: True base: True
...@@ -416,6 +425,12 @@ software: ...@@ -416,6 +425,12 @@ software:
- name: 'XCFun' - name: 'XCFun'
owner: 'mueller1' owner: 'mueller1'
base: True base: True
- name: 'xeus'
owner: 'goebbert1'
base: True
- name: 'xeus-zmq'
owner: 'goebbert1'
base: True
- name: 'xdg-user-dirs' - name: 'xdg-user-dirs'
owner: 'goebbert1' owner: 'goebbert1'
base: True base: True
...@@ -425,6 +440,9 @@ software: ...@@ -425,6 +440,9 @@ software:
- name: 'XServer' - name: 'XServer'
owner: 'goebbert1' owner: 'goebbert1'
base: True base: True
- name: 'xtensor'
owner: 'goebbert1'
base: True
- name: 'yarn' - name: 'yarn'
owner: 'goebbert1' owner: 'goebbert1'
base: True base: True
......
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