Merge branch '2023' into '2023'

Add Extra-P for Stage 2023

See merge request deep-sea/wp3/software/easybuild-repository-deep-sea!47

Golden_Repo/e/Extra-P/4.3.0-alpha-packaging.patch

+diff --git a/setup.py b/setup.py
+index f4ab90d..8659681 100644
+--- a/setup.py
++++ b/setup.py
+@@ -58,7 +58,7 @@ setup(
+         "tqdm~=4.47",
+         "pycubexr>=1.1,<3",
+         "marshmallow~=3.7",
+-        "packaging~=20.0",
++        "packaging>=20.0",
+         "kaitaistruct~=0.9",
+         "protobuf~=3.14",
+         "itanium_demangler~=1.0",

Golden_Repo/e/Extra-P/Extra-P-4.3.0-alpha3-GCCcore-11.3.0-Python-3.10.4.eb

+easyblock = "PythonBundle"
+
+name = 'Extra-P'
+version = '4.3.0-alpha3'
+versionsuffix = '-Python-%(pyver)s'
+homepage = 'https://github.com/extra-p/extrap'
+description = """
+Extra-P is an automatic performance-modeling tool for HPC applications 
+that supports the user in the identification of scalability issues.
+"""
+moduleclass = "perf"
+
+exts_list = [
+    (name, version, {
+        'download_dep_fail': False,
+        'modulename': 'extrap',
+        'sources': [{'source_urls': ['https://github.com/extra-p/extrap/archive/refs/tags/'],
+                     'filename': 'extrap-%(version)s.tar.gz',
+                     'download_filename': 'v%(version)s.tar.gz'}],
+        'checksums': ['91cbc84affe319b4dd7aee3752e9944123759d0513fba8a23c8418327727e7e5',
+                      'fd2e16ff8efef7a6494e779ff4800fff5073a568767335edaa4ca094fde378ab'],
+        'patches': ['4.3.0-alpha-packaging.patch']
+    }),
+]
+
+toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
+use_pip = True
+use_pip_for_deps = True
+pip_ignore_installed = False
+pip_no_index = False
+download_dep_fail = False
+sanity_pip_check = True
+
+runtest = True
+tests = ["%(installdir)s/bin/extrap --help"]
+
+dependencies = [
+    ('Python', '3.10.4'),
+    ('SciPy-bundle', '2022.05', '', ('gcccoremkl', '11.3.0-2022.1.0')),
+    ('sympy', '1.11.1', '', ('gcccoremkl', '11.3.0-2022.1.0')),
+    ('tqdm', '4.64.0'),
+    ('matplotlib', '3.5.2', '', ('gcccoremkl', '11.3.0-2022.1.0')),
+    ('typing-extensions', '4.3.0'),
+    ('Extra-Prof', version)
+]
+
+
+sanity_check_paths = {
+    'files': [
+        "lib/python3.10/site-packages/extrap/extrap/extrapcmd.py",
+        "lib/python3.10/site-packages/extrap/extrap/extrapgui.py"
+    ],
+    'dirs': ["lib/python3.10/site-packages/extrap"]
+}

Golden_Repo/e/Extra-P/Extra-P-DEEP-SEA-V-1-GCCcore-11.3.0-Python-3.10.4.eb

+easyblock = "PythonBundle"
+
+name = 'Extra-P'
+version = 'DEEP-SEA-V-1'
+versionsuffix = '-Python-%(pyver)s'
+homepage = 'https://github.com/extra-p/extrap'
+description = """
+Extra-P is an automatic performance-modeling tool for HPC applications 
+that supports the user in the identification of scalability issues.
+"""
+moduleclass = "perf"
+
+exts_list = [
+    (name, version, {
+        'download_dep_fail': False,
+        'modulename': 'extrap',
+        'sources': [{'source_urls': ['https://github.com/extra-p/extrap/archive/refs/tags/'],
+                     'filename': 'extrap-%(version)s.tar.gz',
+                     'download_filename': '%(version)s.tar.gz'}],
+        'checksums': ['49f08dd830b8a943430e8e82b3cec28eabfac8980832193675ebf62fe28f4eb1'],
+    }),
+]
+
+toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
+use_pip = True
+use_pip_for_deps = True
+pip_ignore_installed = False
+pip_no_index = False
+download_dep_fail = False
+sanity_pip_check = True
+
+runtest = True
+tests = ["%(installdir)s/bin/extrap --help"]
+
+dependencies = [
+    ('Python', '3.10.4'),
+    ('SciPy-bundle', '2022.05', '', ('gcccoremkl', '11.3.0-2022.1.0')),
+    ('sympy', '1.11.1', '', ('gcccoremkl', '11.3.0-2022.1.0')),
+    ('tqdm', '4.64.0'),
+    ('matplotlib', '3.5.2', '', ('gcccoremkl', '11.3.0-2022.1.0')),
+    ('typing-extensions', '4.3.0'),
+    ('Extra-Prof', version)
+]
+
+sanity_check_paths = {
+    'files': [
+        "lib/python3.10/site-packages/extrap/extrap/extrapcmd.py",
+        "lib/python3.10/site-packages/extrap/extrap/extrapgui.py"
+    ],
+    'dirs': ["lib/python3.10/site-packages/extrap"]
+}

Golden_Repo/e/Extra-Prof/Extra-Prof-4.3.0-alpha3-GCCcore-11.3.0.eb

+easyblock = "Binary"
+
+name = 'Extra-Prof'
+version = '4.3.0-alpha3'
+homepage = 'https://github.com/extra-p/extrap'
+description = """
+Extra-Prof is the profiler part of Extra-P for joint CPU-GPU profiling.
+"""
+moduleclass = "perf"
+toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
+
+sources = [
+    {'source_urls': ['https://github.com/extra-p/extrap/archive/refs/tags/'],
+     'filename': 'extrap-%(version)s.tar.gz',
+     'download_filename': 'v%(version)s.tar.gz'}]
+checksums = ['91cbc84affe319b4dd7aee3752e9944123759d0513fba8a23c8418327727e7e5']
+
+extract_sources = True
+install_cmds = ['echo %(installdir)s',
+                'chmod +x %(builddir)s/extrap-%(version)s/tools/extra-prof/*.sh',
+                'EXTRA_PROF_COMPILER="echo" %(builddir)s/extrap-%(version)s/tools/extra-prof/extra-prof-wrapper.sh',
+                'rm %(builddir)s/extrap-%(version)s/tools/extra-prof/msgpack-cxx.tar.gz',
+                'cp -r %(builddir)s/extrap-%(version)s/tools/extra-prof/**  %(installdir)s/']
+
+dependencies = [('CUDA', '11.7', '', SYSTEM)]
+
+sanity_check_paths = {
+    'files': [
+        "extra-prof-wrapper.sh",
+        "mpicxx-wrapper.sh",
+        "mpicc-wrapper.sh",
+        "g++-wrapper.sh",
+        "gcc-wrapper.sh",
+        "nvcc-wrapper.sh"
+    ],
+    'dirs': ["extra_prof", "msgpack"]
+}

Golden_Repo/e/Extra-Prof/Extra-Prof-DEEP-SEA-V-1-GCCcore-11.3.0.eb

+easyblock = "Binary"
+
+name = 'Extra-Prof'
+version = 'DEEP-SEA-V-1'
+homepage = 'https://github.com/extra-p/extrap'
+description = """
+Extra-Prof is the profiler part of Extra-P for joint CPU-GPU profiling.
+"""
+moduleclass = "perf"
+toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
+
+sources = [
+    {'source_urls': ['https://github.com/extra-p/extrap/archive/refs/tags/'],
+     'filename': 'extrap-%(version)s.tar.gz',
+     'download_filename': '%(version)s.tar.gz'}]
+checksums = ['49f08dd830b8a943430e8e82b3cec28eabfac8980832193675ebf62fe28f4eb1']
+
+extract_sources = True
+install_cmds = ['echo %(installdir)s',
+                'chmod +x %(builddir)s/extrap-%(version)s/tools/extra-prof/*.sh',
+                'EXTRA_PROF_COMPILER="echo" %(builddir)s/extrap-%(version)s/tools/extra-prof/extra-prof-wrapper.sh',
+                'rm %(builddir)s/extrap-%(version)s/tools/extra-prof/msgpack-cxx.tar.gz',
+                'cp -r %(builddir)s/extrap-%(version)s/tools/extra-prof/**  %(installdir)s/']
+
+dependencies = [('CUDA', '11.7', '', SYSTEM)]
+
+sanity_check_paths = {
+    'files': [
+        "extra-prof-wrapper.sh",
+        "mpicxx-wrapper.sh",
+        "mpicc-wrapper.sh",
+        "g++-wrapper.sh",
+        "gcc-wrapper.sh",
+        "nvcc-wrapper.sh"
+    ],
+    'dirs': ["extra_prof", "msgpack"]
+}