add PyDeepLearning

Golden_Repo/j/JupyterKernel-PyDeepLearning/JupyterKernel-PyDeepLearning-2023.5-GCCcore-11.3.0-2023.3.6.eb

+easyblock = 'PythonBundle'
+
+name = 'JupyterKernel-PyDeepLearning'
+version = '2023.5'
+local_jupyterver = '2023.3.6'
+versionsuffix = '-' + local_jupyterver
+
+homepage = 'https://www.fz-juelich.de'
+description = """
+Special DeepLearning kernel for Jupyter.
+Project Jupyter exists to develop open-source software, open-standards, and services
+for interactive computing across dozens of programming languages.
+"""
+
+toolchain = {'name': 'GCCcore', 'version': '11.3.0'}
+toolchainopts = {'pic': True}
+
+builddependencies = [
+    ('binutils', '2.38'),
+    # just ensure they exist
+    ('CUDA', '11.7', '', SYSTEM),
+    ('OpenCV', '4.7.0', '-CUDA-%(cudaver)s-contrib', ('gcccoremkl', '11.3.0-2022.1.0')),
+    ('TensorFlow', '2.11.0', '-CUDA-%(cudaver)s', ('gcccoremkl', '11.3.0-2022.1.0')),
+    ('protobuf-python', '3.19.4'),
+    # ('PyTorch', '1.12', '-CUDA-%(cudaver)s', ''),
+    # ('PyTorch-Geometric', '2.1.0', ''),
+    # ('torchvision', '0.13.1', '-CUDA-11.7'),
+    # ('torchaudio', '0.12.1'),
+]
+
+dependencies = [
+    ('Python', '3.10.4'),
+    ('JupyterLab', local_jupyterver),
+]
+
+
+components = [
+    ('logos', '1.0', {
+        'easyblock': 'Binary',
+        'sources': [
+            {'filename': 'logo-32x32.png.base64', 'extract_cmd': "base64 -d %s > %%(builddir)s/logo-32x32.png"},
+            {'filename': 'logo-64x64.png.base64', 'extract_cmd': "base64 -d %s > %%(builddir)s/logo-64x64.png"},
+            {'filename': 'logo-128x128.png.base64', 'extract_cmd': "base64 -d %s > %%(builddir)s/logo-128x128.png"},
+        ],
+        'checksums': [
+            '08651dd90fd0ce20a8f3d62bdbeacf34dfae7a73e61fde912d080222aa00e6b7',
+            'c3230068b407ff172b369208c20a24ed04971ce38e2fdf9116100102e14221a8',
+            'baa78f71dd2bb4e51eab0c653535365e54a717506622bcff4f834d653a17a2bf',
+        ],
+    }),
+]
+
+exts_default_options = {
+    'source_urls': [PYPI_SOURCE],
+    'use_pip': True,
+    'sanity_pip_check': False,  # skip as it requires protobuf, TensorFlow
+    'download_dep_fail': True,
+    'use_pip_for_deps': False,
+}
+
+exts_list = [
+    ('lmdb', '1.1.1', {
+        'checksums': ['165cd1669b29b16c2d5cc8902b90fede15a7ee475c54d466f1444877a3f511ac'],
+    }),
+    ('gviz_api', '1.9.0', {
+        'checksums': ['43d13ccc21834d0501b33a291ef3265e933dbb4bbdca3d34b1ed0a048c0ef640'],
+    }),
+    ('tensorboard_plugin_profile', '2.5.0', {
+        'checksums': ['f832698d87a773b9a017fc4dd5cf598a1ff942ccfbf3392c83fe12c949ab9f52'],
+    }),
+    ('tensorflow_hub', '0.12.0', {
+        'source_tmpl': 'tensorflow_hub-0.12.0-py2.py3-none-any.whl',
+        'checksums': ['822fe5f7338c95efcc3a534011c6689e4309ba2459def87194179c4de8a6e1fc'],
+        'unpack_sources': False,
+        'modulename': False,  # skip sanity check as 'import' will fail without TensorFlow
+    }),
+]
+
+local_kernel_dir = 'pydeeplearning'
+local_kernel_name = 'PyDeepLearning-%s' % version
+
+modextrapaths = {
+    'JUPYTER_PATH': ['share/jupyter'],  # add search path for kernelspecs
+    'HOROVOD_MPI_THREADS_DISABLE': ['1'],  # no mpi by default
+}
+
+# Ensure that the user-specific $HOME/.local/share/jupyter is first entry in JUPYTHER_PATH
+modluafooter = """
+prepend_path("JUPYTER_PATH", pathJoin(os.getenv("HOME"), ".local/share/jupyter"))
+"""
+
+postinstallcmds = [
+    # create kernel skeleton
+    (
+        'python -m ipykernel install --name=%s --prefix=%%(installdir)s && '
+        'mv %%(installdir)s/logo-32x32.png   %%(installdir)s/share/jupyter/kernels/%s/logo-32x32.png && '
+        'mv %%(installdir)s/logo-64x64.png   %%(installdir)s/share/jupyter/kernels/%s/logo-64x64.png && '
+        'mv %%(installdir)s/logo-128x128.png %%(installdir)s/share/jupyter/kernels/%s/logo-128x128.png'
+    ) % (local_kernel_dir, local_kernel_dir, local_kernel_dir, local_kernel_dir),
+
+    # write kernel.sh
+    (
+        '{ cat > %%(installdir)s/share/jupyter/kernels/%s/kernel.sh; } << EOF\n'
+        '#!/bin/bash \n'
+        '\n'
+        '# Load required modules \n'
+        'module purge \n'
+        'module load Stages/${STAGE} \n'
+        'module load GCC \n'
+        'module load OpenMPI \n'
+        'module load %s/.%s%s \n'
+        '\n'
+        'module load OpenCV/4.7.0-CUDA-11.7-contrib \n'
+        'module load TensorFlow/2.11.0-CUDA-11.7 \n'
+        'module load protobuf-python/.3.19.4 \n'
+        'module load PyTorch/1.12.0-CUDA-11.7 \n'
+        'module load PyTorch-Geometric/2.1.0-PyTorch-1.12.0-CUDA-11.7 \n'
+        'module load torchvision/0.13.1-CUDA-11.7 \n'
+        'module load torchaudio/0.12.1 \n'
+        '\n'
+        'export PYTHONPATH=%%(installdir)s/lib/python%%(pyshortver)s/site-packages:\$PYTHONPATH \n'
+        'exec python -m ipykernel \$@\n'
+        '\n'
+        'EOF'
+    ) % (local_kernel_dir, name, version, versionsuffix),
+    'chmod +x %%(installdir)s/share/jupyter/kernels/%s/kernel.sh' % local_kernel_dir,
+
+    # write kernel.json
+    (
+        '{ cat > %%(installdir)s/share/jupyter/kernels/%s/kernel.json; } << \'EOF\'\n'
+        '{ \n'
+        '  "argv": [ \n'
+        '    "%%(installdir)s/share/jupyter/kernels/%s/kernel.sh", \n'
+        '    "-m", \n'
+        '    "ipykernel_launcher", \n'
+        '    "-f", \n'
+        '    "{connection_file}" \n'
+        '  ], \n'
+        '  "display_name": "%s", \n'
+        '  "language": "python", \n'
+        '  "name": "%s", \n'
+        '  "metadata": { \n'
+        '    "debugger": true \n'
+        '  } \n'
+        '}\n'
+        'EOF'
+    ) % (local_kernel_dir, local_kernel_dir, local_kernel_name, local_kernel_name),
+]
+
+sanity_check_paths = {
+    'files': [
+        'share/jupyter/kernels/%s/kernel.sh' % local_kernel_dir,
+        'share/jupyter/kernels/%s/kernel.json' % local_kernel_dir,
+    ],
+    'dirs': [
+        'share/jupyter/kernels/',
+    ],
+}
+
+moduleclass = 'tools'

Golden_Repo/j/JupyterLabCollection/JupyterLabCollection-2023.3.6-GCCcore-11.3.0.eb

@@ -23,7 +23,7 @@ dependencies = [
     ('JupyterKernel-Octave',          '8.2.0',    '-' + version),
     ('JupyterKernel-PyVisualization', '2023.5',   '-' + version),
     ('JupyterKernel-PyQuantum',       '2023.5',   '-' + version),
-    # ('JupyterKernel-PyDeepLearning',  '1.1',      '-' + version),
+    ('JupyterKernel-PyDeepLearning',  '2023.5',   '-' + version),
     ('JupyterKernel-R',               '4.2.1',    '-' + version),
     ('JupyterKernel-Ruby',            '3.0.5',    '-' + version),
     ('JupyterLab', version),