Merge branch 'merge_sprint_28.19.2020' into '2020'

Merge sprint 28.19.2020

See merge request hps-public/easybuild-repository!367

Golden_Repo/d/darshan-runtime/darshan-runtime-3.2.1-gpsmpi-2020.eb

+easyblock = "ConfigureMake"
+name = "darshan-runtime"
+version = "3.2.1"
+
+homepage = 'http://www.mcs.anl.gov/research/projects/darshan/'
+
+description = """Darshan is designed to capture an accurate picture of
+application I/O behavior, including properties such as patterns of
+access within files, with minimum overhead.  The name is taken from a
+Sanskrit word for “sight” or “vision”.
+
+Darshan can be used to investigate and tune the I/O behavior of
+complex HPC applications.  In addition, Darshan’s lightweight design
+makes it suitable for full time deployment for workload
+characterization of large systems.  We hope that such studies will
+help the storage research community to better serve the needs of
+scientific computing.
+
+Darshan was originally developed on the IBM Blue Gene series of
+computers deployed at the Argonne Leadership Computing Facility, but
+it is portable across a wide variety of platforms include the Cray
+XE6, Cray XC30, and Linux clusters.  Darshan routinely instruments
+jobs using up to 786,432 compute cores on the Mira system at ALCF.
+"""
+
+usage = """
+Export the environment variable DARSHAN_LOG_PATH to where the logging
+data should be written, e.g.
+
+LD_PRELOAD=$EBROOTDARSHANMINRUNTIME/lib/libdarshan.so \
+DARSHAN_LOG_PATH=/path/to/your/logdir \
+srun -n 32 ./executable
+
+Note:
+
+Darshan currently only works with C or C++ codes, not with Fortran.
+"""
+
+site_contacts = 'a.strube@fz-juelich.de'
+
+toolchain = {'name': 'gpsmpi', 'version': '2020'}
+
+sources = ['ftp://ftp.mcs.anl.gov/pub/darshan/releases/darshan-%s.tar.gz' % version]
+
+local_subpath = 'darshan-runtime'
+preconfigopts = 'cd %s;' % local_subpath
+configopts = '--with-mem-align=8 --with-log-path-by-env=DARSHAN_LOG_PATH --with-jobid-env=SLURM_JOBID CC=mpicc'
+
+prebuildopts = 'cd %s;' % local_subpath
+
+preinstallopts = 'cd %s;' % local_subpath
+
+sanity_check_paths = {
+    'files': ["lib/libdarshan.so"],
+    'dirs': []
+}
+
+moduleclass = 'lib'

Golden_Repo/d/darshan-util/darshan-util-3.2.1-gpsmpi-2020.eb

+easyblock = "ConfigureMake"
+name = "darshan-util"
+version = "3.2.1"
+
+homepage = 'http://www.mcs.anl.gov/research/projects/darshan/'
+
+description = """Darshan is designed to capture an accurate picture of
+application I/O behavior, including properties such as patterns of
+access within files, with minimum overhead.  The name is taken from a
+Sanskrit word for “sight” or “vision”.
+
+Darshan can be used to investigate and tune the I/O behavior of
+complex HPC applications.  In addition, Darshan’s lightweight design
+makes it suitable for full time deployment for workload
+characterization of large systems.  We hope that such studies will
+help the storage research community to better serve the needs of
+scientific computing.
+
+Darshan was originally developed on the IBM Blue Gene series of
+computers deployed at the Argonne Leadership Computing Facility, but
+it is portable across a wide variety of platforms include the Cray
+XE6, Cray XC30, and Linux clusters.  Darshan routinely instruments
+jobs using up to 786,432 compute cores on the Mira system at ALCF.
+"""
+
+usage = """
+The result is a darshan log file which can be converted using
+
+darshan-job-summary.pl /path/to/your/logdir/mylog.darshan.gz
+
+Note:
+
+Darshan currently only works with C or C++ codes, not with Fortran.
+"""
+
+site_contacts = 'a.strube@fz-juelich.de'
+
+toolchain = {'name': 'gpsmpi', 'version': '2020'}
+
+sources = ['ftp://ftp.mcs.anl.gov/pub/darshan/releases/darshan-%s.tar.gz' % version]
+
+local_subpath = 'darshan-util'
+
+preconfigopts = 'cd %s;' % local_subpath
+
+prebuildopts = 'cd %s;' % local_subpath
+
+preinstallopts = 'cd %s;' % local_subpath
+
+sanity_check_paths = {
+    'files': ["bin/darshan-job-summary.pl"],
+    'dirs': []
+}
+
+dependencies = [
+    ("gnuplot", "5.2.8"),
+    ("Perl", "5.32.0"),
+]
+
+moduleclass = 'lib'

Golden_Repo/i/IDL/IDL-8.5.1-GCCcore-8.3.0.eb

+name = "IDL"
+version = "8.5.1"
+
+homepage = "http://www.exelisvis.com"
+description = """IDL is the trusted scientific programming language used across disciplines to extract meaningful
+visualizations from complex numerical data.
+"""
+
+site_contacts = 'sc@fz-juelich.de'
+
+toolchain = {'name': 'GCCcore', 'version': '8.3.0'}
+
+builddependencies = [
+    ('binutils', '2.32'),
+]
+
+dependencies = [
+    ('X11', '20190311'),
+]
+
+sources = ['idl85envi53sp1linux.x86_64.tar.gz']
+
+sanity_check_paths = {
+    'files' : [],
+    'dirs' : ['idl/bin']
+}
+
+modextravars = {
+    'IDL_DIR': '%(installdir)s/idl',
+    'IDL_LMGRD_LICENSE_FILE': '1706@idllic1.fz-juelich.de:1706@idllic2.fz-juelich.de:1706@idllic3.fz-juelich.de',
+}
+modluafooter =  'prepend_path("LM_LICENSE_FILE", "1706@idllic1.fz-juelich.de:1706@idllic2.fz-juelich.de:1706@idllic3.fz-juelich.de")'
+
+moduleclass = "vis"

Golden_Repo/j/Julia.MPI/Julia.MPI-0.15.1-gpsmkl-2020.eb

+easyblock = 'PackedBinary'
+name = 'Julia.MPI'
+version = '0.15.1'
+
+homepage = 'https://juliaparallel.github.io/MPI.jl/stable/configuration/'
+description = """This provides Julia interface to the Message Passing Interface (MPI),
+roughly inspired by mpi4py.
+"""
+
+site_contacts = 'j.goebbert@fz-juelich.de'
+
+toolchain = {'name': 'gpsmkl', 'version': '2020'}
+toolchainopts = {'pic': True, 'usempi': True}
+
+sources = [{
+    'source_urls': ['https://github.com/JuliaParallel/MPI.jl/archive/'],
+    'filename': 'MPI.jl-%(version)s.tar.gz',
+    'download_filename': 'v%(version)s.tar.gz',
+    'extract_cmd': "tar xfvz %s",
+}]
+
+builddependencies = [
+    ('binutils', '2.34'),
+]
+
+dependencies = [
+    ('Julia', '1.5.2', '', ('gcccoremkl', '9.3.0-2020.2.254')),
+]
+
+extract_sources = True
+install_cmd = (
+    'export JULIA_DEPOT_PATH=%(installdir)s; '
+    '$EBROOTJULIA/bin/julia -e \'ENV["JULIA_MPI_BINARY"]="system"; using Pkg; Pkg.add("MPI"); Pkg.build("MPI")\'; ' +
+    '$EBROOTJULIA/bin/julia -e \'import MPI;  MPI.install_mpiexecjl()\' ')
+
+modextrapaths = {
+    'PATH': 'bin',
+    'JULIA_DEPOT_PATH': '',
+}
+
+# Ensure that the user-specific $HOME/.julia is always first entry in JULIA_DEPOT_PATH
+modluafooter = """
+    prepend_path("JULIA_DEPOT_PATH", pathJoin(os.getenv("HOME"), ".julia"))
+"""
+
+sanity_check_paths = {
+    'files': ['bin/mpiexecjl'],
+    'dirs': ['bin', 'registries', 'packages/MPI']
+}
+
+moduleclass = 'lang'

Golden_Repo/j/Julia/Julia-1.5.2-gcccoremkl-9.3.0-2020.2.254.eb

+easyblock = 'ConfigureMake'
+name = 'Julia'
+version = '1.5.2'
+
+homepage = 'https://julialang.org/'
+description = """Julia was designed from the beginning for high performance.
+Julia programs compile to efficient native code for multiple platforms via LLVM
+"""
+
+site_contacts = 'j.goebbert@fz-juelich.de'
+
+toolchain = {'name': 'gcccoremkl', 'version': '9.3.0-2020.2.254'}
+toolchainopts = {'pic': True}
+
+source_urls = ['https://github.com/JuliaLang/julia/releases/download/v%(version)s/']
+sources = ['julia-%(version)s-full.tar.gz']
+
+builddependencies = [
+    ('binutils', '2.34'),
+    ('git', '2.28.0'),
+    ('CMake', '3.18.0'),
+]
+
+dependencies = [
+    ('GMP', '6.2.0'),
+]
+
+osdependencies = [('openssl')]
+
+skipsteps = ['configure']
+buildopts = " USE_SYSTEM_GMP=1 USE_SYSTEM_CURL=1 USE_INTEL_MKL=1 "
+installopts = "prefix=%(installdir)s "
+
+modextrapaths = {
+    'PATH': 'bin',
+}
+
+sanity_check_paths = {
+    'files': ['bin/julia', 'include/julia/julia.h', 'lib/libjulia.so'],
+    'dirs': ['bin', 'etc', 'include', 'lib', 'share']
+}
+
+moduleclass = 'lang'

Golden_Repo/p/ParaView/ParaView-5.8.1-EGL-gpsmkl-2020-Python-3.8.5.eb

+easyblock = 'CMakeMake'
+
+name = 'ParaView'
+version = '5.8.1'
+versionsuffix = '-EGL-Python-%(pyver)s'
+
+homepage = "http://www.paraview.org"
+description = """Paraview is a scientific parallel visualizer.
+"""
+
+site_contacts = 'j.goebbert@fz-juelich.de'
+
+toolchain = {'name': 'gpsmkl', 'version': '2020'}
+toolchainopts = {'pic': True, 'usempi': True}
+
+local_dwnlsfx_src = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=Sources&downloadFile='
+local_dwnlsfx_dat = 'download.php?submit=Download&version=v%(version_major_minor)s&type=data&os=Sources&downloadFile='
+local_dwnlsfx_tdat = 'download.php?submit=Download&version=v%(version_major_minor)s&type=data&os=Sources&downloadFile='
+
+source_urls = [('http://www.paraview.org/paraview-downloads/%s' % local_dwnlsfx_src),
+               ('http://www.paraview.org/paraview-downloads/%s' % local_dwnlsfx_dat)]
+#              ('http://www.paraview.org/paraview-downloads/%s' % local_dwnlsfx_tdat),
+
+sources = [("ParaView-v%(version)s.tar.gz"),
+           ("ParaViewData-v%(version)s.tar.gz")]
+#          ("ParaViewTestingData-v%(version)s.tar.gz"),
+
+checksums = [('sha256', '384241fc69bbdb412465dcb5ef88b88ee7ae0e92e7d7cde53be54b19296cf9fa'),
+             ('sha256', '9bf8f6acc4533520143ba2e19a04f6c34b1537c0b9c95d8e975623eafe3acea9')]
+
+patches = [
+    ("python-5.8.1-simpleCatalystSupport_0.4.patch"),
+]
+
+builddependencies = [
+    ('CMake', '3.18.0'),
+]
+
+dependencies = [
+    ('Python', '3.8.5'),
+    ('Boost', '1.74.0', '', ('gpsmpi', '2020')),
+    ('X11', '20200222'),
+    ('bzip2', '1.0.8'),
+    ('HDF5', '1.10.6'),
+    ('FFmpeg', '4.3.1'),
+    ('Embree', '3.8.0'),
+    ('OSPRay', '1.8.4'),
+    ('libpng', '1.6.37'),
+    ('expat', '2.2.9'),
+    ('freetype', '2.10.1'),
+    ('libjpeg-turbo', '2.0.5'),
+    ('libxml2', '2.9.10'),
+    ('LibTIFF', '4.1.0'),
+    ('zlib', '1.2.11'),
+    ('netCDF', '4.7.4'),
+    ('netCDF-C++4', '4.3.1'),
+    ('netCDF-Fortran', '4.5.3'),
+    ('mpi4py', '3.0.3', '-Python-%(pyver)s'),
+    # ('VTK', '8.2.0', '-Python-%(pyver)s', ('gcccoremkl', '8.3.0-2019.3.199')),
+    # ('VTKm','1.1.0','-AVX2'),
+    ('Qt5', '5.14.2'),
+    ('SciPy-Stack', '2020', '-Python-%(pyver)s', ('gcccoremkl', '9.3.0-2020.2.254')),
+    ('VirtualGL', '2.6.4'),
+    ('OpenGL', '2020'),
+]
+
+separate_build_dir = True
+# parallel = 24
+
+########################################################################################
+# check ParaView Superbuild options                                                    #
+# https://gitlab.kitware.com/paraview/paraview-superbuild/tree/master                  #
+#                                                                                      #
+# check ParaView Build documenation                                                    #
+# https://gitlab.kitware.com/paraview/paraview/blob/master/Documentation/dev/build.md  #
+########################################################################################
+
+configopts = '-DCMAKE_POLICY_DEFAULT_CMP0074=OLD '
+configopts += '-DCMAKE_POLICY_DEFAULT_CMP0077=OLD '
+
+# --- general settings --- #
+configopts += '-DCMAKE_CXX_STANDARD=11 '
+configopts += '-DCXX_STANDARD_REQUIRED=ON '
+configopts += '-DCMAKE_CXX_EXTENSIONS=OFF '  # eg.-std=c++11 rather than -std=gnu++11
+configopts += '-DVTK_USE_CXX11_FEATURES=ON '
+# configopts  = '-DCMAKE_VERBOSE_MAKEFILE=ON '
+
+configopts += '-DBUILD_TESTING=OFF '  # Without internet connection turn off testing
+# Or consult https://gitlab.kitware.com/vtk/vtk/blob/master/Documentation/dev/git/data.md
+# and download ExternalData to $EASYBUILD_SOURCEPATH and adjust -DExternalData_OBJECT_STORES accordingly
+# configopts += '-DExternalData_OBJECT_STORES=%(builddir)s/ExternalData '
+
+configopts += '-DBUILD_EXAMPLES=ON '
+
+configopts += '-DCMAKE_BUILD_TYPE=Release '
+configopts += '-DZLIB_LIBRARY_DEBUG=$EBROOTZLIB/lib/libz.so '
+
+# https://forum.openframeworks.cc/t/nvidia-drivers-pthreads-and-segfaults/2524
+configopts += '-DCMAKE_CXX_FLAGS="-lpthread $CMAKE_CXX_FLAGS" '
+configopts += '-DCMAKE_C_FLAGS="-lpthread $CMAKE_C_FLAGS" '
+
+configopts += '-DPARAVIEW_BUILD_EDITION=CANONICAL '
+configopts += '-DPARAVIEW_BUILD_WITH_KITS=OFF '
+configopts += '-DPARAVIEW_USE_QT=OFF '
+configopts += '-DPARAVIEW_QT_VERSION=5 '
+configopts += '-DPARAVIEW_ENABLE_WEB=ON '
+
+configopts += '-DPARAVIEW_SHARED_LIBS=ON '
+configopts += '-DPARAVIEW_USE_PYTHON=ON '
+configopts += '-DPARAVIEW_PYTHON_VERSION=3 '
+configopts += "-DPYTHON_EXECUTABLE=$EBROOTPYTHON/bin/python "
+
+configopts += '-DVTK_PYTHON_VERSION=3 '
+configopts += '-DVTK_NO_PYTHON_THREADS=OFF '
+configopts += '-DVTK_PYTHON_FULL_THREADSAFE=OFF '  # visibility depends on VTK_NO_PYTHON_THREADS=OFF
+# If you pass VTK_PYTHON_FULL_THREADSAFE to true, then each and every call to python will be protected with GIL,
+# ensuring that you can have eg. other python interpreter in your application and still use python wrapping in vtk.
+# configopts += '-DUSE_EXTERNAL_VTK:BOOL=ON '
+
+# --- parallel (on-node) --- #
+# https://blog.kitware.com/simple-parallel-computing-with-vtksmptools-2/
+configopts += '-DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP '
+
+# --- parallel (distributed) --- #
+configopts += '-DMPIEXEC_MAX_NUMPROCS=24 '
+configopts += '-DPARAVIEW_USE_MPI=ON '
+
+# --- IO --- #
+configopts += '-DXDMF_BUILD_MPI=ON '
+configopts += '-DPARAVIEW_ENABLE_XDMF3=ON '
+
+# --- large data --- #
+configopts += '-DVTK_USE_64BIT_IDS=ON '
+configopts += '-DVTK_USE_LARGE_DATA=ON '
+
+# --- rendering --- #
+configopts += '-DVTK_RENDERING_BACKEND:STRING=OpenGL2 '
+
+# OpenGL (hardware)
+#  https://kitware.github.io/paraview-docs/latest/cxx/Offscreen.html
+#    If VTK_OPENGL_HAS_EGL or VTK_OPENGL_HAS_OSMESA is ON, the build supports headless rendering,
+#       otherwise VTK_USE_X must be ON and the build does not support headless,
+#       but can still support offscreen rendering.
+#    If VTK_USE_X is OFF, then either VTK_OPENGL_HAS_OSMESA or VTK_OPENGL_HAS_EGL must be ON. 
+#       Then the build does not support onscreen rendering, but only headless rendering.
+#    If PARAVIEW_BUILD_QT_GUI is ON and VTK_USE_X is ON, while ParaView command line tools won't link against
+#       or use X calls, Qt will and hence an accessible X server is still needed to run the desktop client.
+#    If VTK_OPENGL_HAS_OSMESA is ON, and VTK_USE_X is ON, 
+#       then all the OpenGL and OSMesa variables should point to the Mesa libraries.
+#    Likewise, if VTK_OPENGL_HAS_EGL is ON and VTK_USE_X is ON, then all the OpenGL and EGL variables
+#       should point to the system libraries providing both, typically the NVidia libraries.
+
+configopts += '-DOpenGL_GL_PREFERENCE=GLVND '
+configopts += '-DVTK_REPORT_OPENGL_ERRORS_IN_RELEASE_BUILDS=OFF '
+
+configopts += "-DOPENGL_INCLUDE_DIR=${EBROOTOPENGL}/include "
+configopts += "-DOPENGL_GLX_INCLUDE_DIR=${EBROOTOPENGL}/include "
+configopts += "-DOPENGL_EGL_INCLUDE_DIR=${EBROOTOPENGL}/include "
+# configopts += "-DOPENGL_xmesa_INCLUDE_DIR=IGNORE "
+
+configopts += "-DOPENGL_opengl_LIBRARY=${EBROOTOPENGL}/lib/libOpenGL.so.0 "
+configopts += "-DOPENGL_gl_LIBRARY=${EBROOTOPENGL}/lib/libGL.so "
+configopts += "-DOPENGL_glx_LIBRARY=${EBROOTOPENGL}/lib/libGLX.so.0 "
+configopts += "-DOPENGL_glu_LIBRARY=${EBROOTOPENGL}/lib/libGLU.so "
+configopts += "-DOPENGL_egl_LIBRARY=${EBROOTOPENGL}/lib/libEGL.so.1 "
+
+# OpenGL over X
+# configopts += '-DVTK_USE_X=ON '  # OFF:headless rendering
+# already considered by Qt (https://gitlab.kitware.com/lorensen/vtk/commit/b29f6db3f746d84f830c81e4212e48db192e4dbb)
+# configopts += '-DVTK_DEFAULT_RENDER_WINDOW_OFFSCREEN=OFF '
+# configopts += '-DVTK_OPENGL_HAS_OSMESA=OFF '  # http://www.paraview.org/Wiki/ParaView_And_Mesa_3D
+
+# EGL (off-screen rendering with OpenGL, but without the need for X)
+# call pvserver with –egl-device-index=0 or 1 and –disable-xdisplay-test
+configopts += '-DVTK_OPENGL_HAS_EGL=ON '
+configopts += '-DVTK_OPENGL_HAS_OSMESA=OFF '  # http://www.paraview.org/Wiki/ParaView_And_Mesa_3D
+configopts += '-DVTK_USE_X=OFF '
+configopts += '-DVTK_DEFAULT_EGL_DEVICE_INDEX=0 '
+# configopts += '-DEGL_INCLUDE_DIR=${EBROOTOPENGL}/include/EGL/ ' # https://www.khronos.org/registry/EGL/
+# configopts += '-DEGL_LIBRARY=${EBROOTOPENGL}/lib/libEGL.so.1 '
+# configopts += '-DEGL_opengl_LIBRARY=${EBROOTOPENGL}/lib/libOpenGL.so.0 '
+# configopts += '-DEGL_gldispatch_LIBRARY=${EBROOTOPENGL}/lib/libGLdispatch.so.0 ' # <path_to_libGLdispatch.so.0>
+
+# OSMesa (software)
+# With OSMesa the DISPLAY variable has no meaning and is not needed
+# When ON, implies that ParaView can use OSMesa to support headless modes of operation.
+# configopts += '-DVTK_OPENGL_HAS_OSMESA=ON ' # http://www.paraview.org/Wiki/ParaView_And_Mesa_3D
+# configopts += '-DVTK_USE_X=OFF '
+# configopts += '-DVTK_DEFAULT_RENDER_WINDOW_OFFSCREEN=ON '
+# configopts += '-DOSMESA_INCLUDE_DIR=${EBROOTOPENGL}/include '
+# configopts += '-DOSMESA_LIBRARY=${EBROOTOPENGL}/lib/libOSMesa.so '
+
+# Raytracing
+configopts += '-DPARAVIEW_ENABLE_RAYTRACING=ON '
+configopts += '-DVTK_ENABLE_OSPRAY=ON '
+configopts += '-DVTK_ENABLE_VISRTX=OFF '
+
+configopts += '-DPARAVIEW_USE_OSPRAY=ON '
+configopts += "-Dospray_DIR=${EBROOTOSPRAY} "
+configopts += "-Dembree_DIR=${EBROOTEMBREE}/lib64/cmake/embree-3.8.0 "
+configopts += '-DModule_vtkRenderingOSPRay=ON '
+configopts += '-DVTKOSPRAY_ENABLE_DENOISER=OFF '
+
+# --- extra libs --- #
+# configopts += "-DVTKm_DIR=$EBROOTVTKM/lib/cmake/vtkm-1.1/ "
+configopts += '-DPARAVIEW_USE_VTKM=ON '
+configopts += '-DModule_vtkAcceleratorsVTKm=ON '
+configopts += '-DVTKm_Vectorization=AVX2 '
+configopts += '-DVTKm_ENABLE_OPENMP=ON '
+# configopts += '-DVTKm_ENABLE_MPI=ON '
+# configopts += '-DVTKm_ENABLE_LOGGING=ON '
+# configopts += '-DVTKm_ENABLE_CUDA=ON '
+
+configopts += "-DFFMPEG_ROOT=$EBROOTFFMPEG "
+configopts += '-DPARAVIEW_ENABLE_FFMPEG=ON '
+configopts += '-DModule_vtkIOFFMPEG=ON '
+configopts += '-DModule_vtkIOVideo=ON '
+
+configopts += '-DModule_SignedTensor=ON '
+
+configopts += '-DModule_vtkDICOM=ON '
+
+# configopts += '-DModule_vtkFiltersMatlab=OFF '
+configopts += '-DModule_vtkFiltersReebGraph=ON '
+configopts += '-DModule_vtkFiltersSMP=ON '
+configopts += '-DModule_vtkFiltersSelection=ON '
+# configopts += '-DModule_vtkFiltersStatisticsGnu=OFF '
+configopts += '-DModule_vtkFiltersTopology=ON '
+
+# --- coupling --- #
+configopts += '-DPARAVIEW_USE_VISITBRIDGE=ON '
+configopts += '-DPARAVIEW_ENABLE_CATALYST=ON '
+
+# --- development & testing --- #
+configopts += '-DPARAVIEW_INSTALL_DEVELOPMENT_FILES=ON '
+configopts += '-DPARAVIEW_BUILD_DEVELOPER_DOCUMENTATION=OFF '
+configopts += '-DPARAVIEW_BUILD_EXAMPLES=OFF '
+configopts += '-DPARAVIEW_BUILD_TESTING=OFF '
+configopts += '-DPARAVIEW_BUILD_VTK_TESTING=OFF '
+configopts += '-DCTEST_TEST_TIMEOUT=10800 '
+configopts += '-DExternalData_TIMEOUT_INACTIVITY=0 '
+
+# --- XDMF options --- #
+configopts += '-DXDMF_USE_BZIP2=ON '
+configopts += '-DXDMF_USE_GZIP=ON '
+
+# --- VTK external libraries --- #
+configopts += '-DVTK_USE_SYSTEM_EXPAT=ON '
+configopts += '-DVTK_USE_SYSTEM_FREETYPE=ON '
+configopts += '-DVTK_USE_SYSTEM_HDF5=ON '
+configopts += '-DVTK_USE_SYSTEM_JPEG=ON '
+configopts += '-DVTK_USE_SYSTEM_LIBXML2=ON '
+configopts += '-DVTK_USE_SYSTEM_MPI4PY=ON '
+configopts += '-DVTK_USE_SYSTEM_NETCDF=ON '
+configopts += '-DVTK_USE_SYSTEM_PNG=ON '
+configopts += '-DVTK_USE_SYSTEM_PYGMENTS=ON '
+configopts += '-DVTK_USE_SYSTEM_SIX=ON '
+configopts += '-DVTK_USE_SYSTEM_TIFF=ON '
+configopts += '-DVTK_USE_SYSTEM_ZLIB=ON '
+configopts += '-DNETCDF_CXX_ROOT=$EBROOTNETCDFMINCPLUSPLUS '
+configopts += '-DNETCDF_F77_ROOT=$EBROOTNETCDFMINFORTRAN '
+configopts += '-DNETCDF_F90_ROOT=$EBROOTNETCDFMINFORTRAN '
+
+# --- ParaView Plugins --- #
+
+# --- ParaView Plugin Autoload --- #
+# configopts += '-DPARAVIEW_AUTOLOAD_PLUGIN_AnalyzeNIfTIIO=ON '
+# configopts += '-DPARAVIEW_AUTOLOAD_PLUGIN_SurfaceLIC=ON '  # can result in error
+#                     ( 489.245s) [paraview ]vtkOpenGLVertexArrayObj:293 ERR| vtkOpenGLVertexArrayObject (0x3cd7bc0)
+#                     ( 489.245s) [paraview ]vtkOpenGLRenderUtilitie:78 WARN| Error setting 'vertexMC' in shader VAO.
+#                                https://www.paraview.org/pipermail/paraview/2016-March/036518.html
+
+# --- infos
+# -- Plugin: AcceleratedAlgorithms - Testing plugin : Enabled
+#  -- Plugin: AdiosReader - Reader for *.bp files based on Adios : Disabled
+#  -- Plugin: AdiosStagingReader - Performs staging reads from simulations using ADIOS : Disabled
+# -- Plugin: AnalyzeNIfTIIO - Reader/Writer for Analyze and NifTI files : Enabled
+# -- Plugin: ArrowGlyph - Glyph with customizable Arrows : Enabled
+# -- Plugin: CDIReader - ICON netCDF/CDI Reader : Enabled
+# -- Plugin: DigitalRockPhysics - Digital Rock Physics analysis filters : Enabled
+# -- Plugin: EmbossingRepresentations - Embossing representations : Enabled
+# -- Plugin: EyeDomeLighting - Add 3D View with eye-dome Lighting support : Enabled
+# -- Plugin: GMVReader - Reader for binary or ASCII files stored in General Mesh Viewer file format : Enabled
+# -- Plugin: GenericIOReader - GenericIO Reader for HACC data : Enabled
+# -- Plugin: GeodesicMeasurement - Geodesic Measurement : Enabled
+#  -- Plugin: GmshReader - Reader for visualization of high-order polynomial solutions under the Gmsh format : off
+#  -- Plugin: InSituExodus - Experimental memory-conserving Exodus II file reader. : Disabled
+# -- Plugin: LagrangianParticleTracker - Highly customizable filter for particle tracking : Enabled
+# -- Plugin: MooseXfemClip - Clip partial elements generated by MOOSE XFEM : Enabled
+# -- Plugin: Moments - Filters for Flux and Circulation Fields : Enabled
+# -- Plugin: NetCDFTimeAnnotationPlugin - Provides NetCDF Time Annotation filter : Enabled
+#            netcdftime Python module not found! NetCDFTimeAnnotationPlugin not be available until it is installed.
+# -- Plugin 'NetCDFTimeAnnotationPlugin' lists plugin library named 'NetCDFTimeAnnotationPlugin'
+# -- Plugin: NonOrthogonalSource - Non Orthogonal Source code sample : Enabled
+#  -- Plugin: OpenVR - OpenVR Support : Disabled
+#  -- Plugin: PythonQtPlugin - PythonQt Plugin : Disabled
+# -- Plugin: SLACTools - SLAC Tools : Enabled
+# -- Plugin: SierraPlotTools - Sierra Plotting Tools : Enabled
+# -- Plugin: StreamLinesRepresentation - Add animated Stream Lines representation for any type of dataset : Enabled
+# -- Plugin: StreamingParticles - Render Particles with Streaming : Enabled
+# -- Plugin: SurfaceLIC - Add Surface-LIC vector visualization support : Enabled
+#  -- Plugin: TemporalParallelismScriptGenerator - Plugin for creating Python spatio-temporal processing scripts : off
+# -- Plugin: PacMan - Testing plugin : Enabled
+# -- Plugin: ThickenLayeredCells - Filter to thicken layered cells : Enabled
+#  -- Plugin: VRPlugin - Virtual Reality Devices and Interactor styles : Disabled
+# -- Plugin: VTKmFilters - VTKm many-core filters : Enabled
+#  -- Plugin: VaporPlugin - Plugin to read NCAR VDR files : Disabled
+# -- Plugin: pvNVIDIAIndeX - Plugin for NVIDIA IndeX : Enabled
+
+# #########################################################
+# The ParaView server can be cranky, test downloads are quite often failing
+# Using ; insted of && gives a second chance to download the test files, if the first serial attempt would fail.
+# prebuildopts = 'make VTKData ;' # only if: configopts += '-DBUILD_TESTING=ON'
+
+postinstallcmds = ['python -m compileall %(installdir)s/lib64/python3.6/site-packages/']
+#    'cp -a %(builddir)s/ParaView-v%(version)s/  %(installdir)s/src', # copy source from build dir to install dir
+#    '', # move debug info to separate files: 
+#          http://stackoverflow.com/questions/866721/how-to-generate-gcc-debug-symbol-outside-the-build-target
+#    '', # debugedit -i --base-dir=%(builddir)s/ParaView-v%(version)s --dest-dir= %(installdir)s/src <file.debug>
+#        # change path to source in debug info    
+
+modextravars = {'CUDA_VISIBLE_DEVICES': '0,1'}
+
+# OpenSWR fully supports OpenGL 3.0 and most of 3.3, but ParaView requires 3.2 -> clame to fully support 3.2
+modextravars = {'MESA_GL_VERSION_OVERRIDE': '3.2'}
+# modextravars = {'MESA_GLSL_VERSION_OVERRIDE': '??'} 
+
+modextravars = {
+    #  OpenMP will choose an optimum number of threads by default, which is usually the number of cores
+    # 'OMP_NUM_THREADS': '28', # fix number of threads used by paraview filters and parallel sections in the code
+    #  threads used by ospray - details https://github.com/ospray/ospray/blob/release-2.0.x/ospray/api/Device.cpp#L88
+    #  unset => OSPRAY uses all hardware threads
+    # 'OSPRAY_THREADS': '14',     # OSPRay <  2.0
+    # 'OSPRAY_NUM_THREADS': '14', # OSPRay >= 2.0
+    #  When TBB is used for OSPRAY: tbb::task_scheduler_init::default_num_threads() is default if no OSPRAY_NUM_THREADS
+    #    https://github.com/ospray/ospcommon/blob/master/ospcommon/tasking/detail/tasking_system_init.cpp#L47
+    #    https://www.threadingbuildingblocks.org/docs/doxygen/a00150.html
+    #  more ospray definitions: https://www.ospray.org/documentation.html#environment-variables
+    'KNOB_MAX_WORKER_THREADS': '65535',  # max. threads used by OpenSWR (limited by number of hardware threads)
+    #  details in https://gitlab.version.fz-juelich.de/vis/vis-software/issues/14
+    #  more knob defs: https://github.com/mesa3d/mesa/blob/master/src/gallium/docs/source/drivers/openswr/knobs.rst
+}
+
+modextrapaths = {'PYTHONPATH': 'lib64/python%(pyshortver)s/site-packages'}
+
+moduleclass = 'vis'

Golden_Repo/p/ParaView/ParaView-5.8.1-gpsmkl-2020-Python-3.8.5.eb

+easyblock = 'CMakeMake'
+
+name = 'ParaView'
+version = '5.8.1'
+versionsuffix = '-Python-%(pyver)s'
+
+homepage = "http://www.paraview.org"
+description = """Paraview is a scientific parallel visualizer.
+"""
+
+site_contacts = 'j.goebbert@fz-juelich.de'
+
+toolchain = {'name': 'gpsmkl', 'version': '2020'}
+toolchainopts = {'pic': True, 'usempi': True}
+
+local_dwnlsfx_src = 'download.php?submit=Download&version=v%(version_major_minor)s&type=source&os=Sources&downloadFile='
+local_dwnlsfx_dat = 'download.php?submit=Download&version=v%(version_major_minor)s&type=data&os=Sources&downloadFile='
+local_dwnlsfx_tdat = 'download.php?submit=Download&version=v%(version_major_minor)s&type=data&os=Sources&downloadFile='
+
+source_urls = [('http://www.paraview.org/paraview-downloads/%s' % local_dwnlsfx_src),
+               ('http://www.paraview.org/paraview-downloads/%s' % local_dwnlsfx_dat)]
+#              ('http://www.paraview.org/paraview-downloads/%s' % local_dwnlsfx_tdat),
+
+sources = [("ParaView-v%(version)s.tar.gz"),
+           ("ParaViewData-v%(version)s.tar.gz")]
+#          ("ParaViewTestingData-v%(version)s.tar.gz"),
+
+checksums = [('sha256', '384241fc69bbdb412465dcb5ef88b88ee7ae0e92e7d7cde53be54b19296cf9fa'),
+             ('sha256', '9bf8f6acc4533520143ba2e19a04f6c34b1537c0b9c95d8e975623eafe3acea9')]
+
+patches = [
+    ("python-5.8.1-simpleCatalystSupport_0.4.patch"),
+]
+
+builddependencies = [
+    ('CMake', '3.18.0'),
+]
+
+dependencies = [
+    ('Python', '3.8.5'),
+    ('Boost', '1.74.0', '', ('gpsmpi', '2020')),
+    ('X11', '20200222'),
+    ('bzip2', '1.0.8'),
+    ('HDF5', '1.10.6'),
+    ('FFmpeg', '4.3.1'),
+    ('Embree', '3.8.0'),
+    ('OSPRay', '1.8.4'),
+    ('libpng', '1.6.37'),
+    ('expat', '2.2.9'),
+    ('freetype', '2.10.1'),
+    ('libjpeg-turbo', '2.0.5'),
+    ('libxml2', '2.9.10'),
+    ('LibTIFF', '4.1.0'),
+    ('zlib', '1.2.11'),
+    ('netCDF', '4.7.4'),
+    ('netCDF-C++4', '4.3.1'),
+    ('netCDF-Fortran', '4.5.3'),
+    ('mpi4py', '3.0.3', '-Python-%(pyver)s'),
+    # ('VTK', '8.2.0', '-Python-%(pyver)s', ('gcccoremkl', '8.3.0-2019.3.199')),
+    # ('VTKm','1.1.0','-AVX2'),
+    ('Qt5', '5.14.2'),
+    ('SciPy-Stack', '2020', '-Python-%(pyver)s', ('gcccoremkl', '9.3.0-2020.2.254')),
+    ('VirtualGL', '2.6.4'),
+    ('OpenGL', '2020'),
+]
+
+separate_build_dir = True
+# parallel = 24
+
+########################################################################################
+# check ParaView Superbuild options                                                    #
+# https://gitlab.kitware.com/paraview/paraview-superbuild/tree/master                  #
+#                                                                                      #
+# check ParaView Build documenation                                                    #
+# https://gitlab.kitware.com/paraview/paraview/blob/master/Documentation/dev/build.md  #
+########################################################################################
+
+configopts = '-DCMAKE_POLICY_DEFAULT_CMP0074=OLD '
+configopts += '-DCMAKE_POLICY_DEFAULT_CMP0077=OLD '
+
+# --- general settings --- #
+configopts += '-DCMAKE_CXX_STANDARD=11 '
+configopts += '-DCXX_STANDARD_REQUIRED=ON '
+configopts += '-DCMAKE_CXX_EXTENSIONS=OFF '  # eg.-std=c++11 rather than -std=gnu++11
+configopts += '-DVTK_USE_CXX11_FEATURES=ON '
+# configopts  = '-DCMAKE_VERBOSE_MAKEFILE=ON '
+
+configopts += '-DBUILD_TESTING=OFF '  # Without internet connection turn off testing
+# Or consult https://gitlab.kitware.com/vtk/vtk/blob/master/Documentation/dev/git/data.md
+# and download ExternalData to $EASYBUILD_SOURCEPATH and adjust -DExternalData_OBJECT_STORES accordingly
+# configopts += '-DExternalData_OBJECT_STORES=%(builddir)s/ExternalData '
+
+configopts += '-DBUILD_EXAMPLES=ON '
+
+configopts += '-DCMAKE_BUILD_TYPE=Release '
+configopts += '-DZLIB_LIBRARY_DEBUG=$EBROOTZLIB/lib/libz.so '
+
+# https://forum.openframeworks.cc/t/nvidia-drivers-pthreads-and-segfaults/2524
+configopts += '-DCMAKE_CXX_FLAGS="-lpthread $CMAKE_CXX_FLAGS" '
+configopts += '-DCMAKE_C_FLAGS="-lpthread $CMAKE_C_FLAGS" '
+
+configopts += '-DPARAVIEW_BUILD_EDITION=CANONICAL '
+configopts += '-DPARAVIEW_BUILD_WITH_KITS=OFF '
+configopts += '-DPARAVIEW_USE_QT=ON '
+configopts += '-DPARAVIEW_QT_VERSION=5 '
+configopts += '-DPARAVIEW_ENABLE_WEB=ON '
+
+configopts += '-DPARAVIEW_SHARED_LIBS=ON '
+configopts += '-DPARAVIEW_USE_PYTHON=ON '
+configopts += '-DPARAVIEW_PYTHON_VERSION=3 '
+configopts += "-DPYTHON_EXECUTABLE=$EBROOTPYTHON/bin/python "
+
+configopts += '-DVTK_PYTHON_VERSION=3 '
+configopts += '-DVTK_NO_PYTHON_THREADS=OFF '
+configopts += '-DVTK_PYTHON_FULL_THREADSAFE=OFF '  # visibility depends on VTK_NO_PYTHON_THREADS=OFF
+# If you pass VTK_PYTHON_FULL_THREADSAFE to true, then each and every call to python will be protected with GIL,
+# ensuring that you can have eg. other python interpreter in your application and still use python wrapping in vtk.
+# configopts += '-DUSE_EXTERNAL_VTK:BOOL=ON '
+
+# --- parallel (on-node) --- #
+# https://blog.kitware.com/simple-parallel-computing-with-vtksmptools-2/
+configopts += '-DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP '
+
+# --- parallel (distributed) --- #
+configopts += '-DMPIEXEC_MAX_NUMPROCS=24 '
+configopts += '-DPARAVIEW_USE_MPI=ON '
+
+# --- IO --- #
+configopts += '-DXDMF_BUILD_MPI=ON '
+configopts += '-DPARAVIEW_ENABLE_XDMF3=ON '
+
+# --- large data --- #
+configopts += '-DVTK_USE_64BIT_IDS=ON '
+configopts += '-DVTK_USE_LARGE_DATA=ON '
+
+# --- rendering --- #
+configopts += '-DVTK_RENDERING_BACKEND:STRING=OpenGL2 '
+
+# OpenGL (hardware)
+#  https://kitware.github.io/paraview-docs/latest/cxx/Offscreen.html
+#    If VTK_OPENGL_HAS_EGL or VTK_OPENGL_HAS_OSMESA is ON, the build supports headless rendering,
+#       otherwise VTK_USE_X must be ON and the build does not support headless,
+#       but can still support offscreen rendering.
+#    If VTK_USE_X is OFF, then either VTK_OPENGL_HAS_OSMESA or VTK_OPENGL_HAS_EGL must be ON. 
+#       Then the build does not support onscreen rendering, but only headless rendering.
+#    If PARAVIEW_BUILD_QT_GUI is ON and VTK_USE_X is ON, while ParaView command line tools won't link against
+#       or use X calls, Qt will and hence an accessible X server is still needed to run the desktop client.
+#    If VTK_OPENGL_HAS_OSMESA is ON, and VTK_USE_X is ON, 
+#       then all the OpenGL and OSMesa variables should point to the Mesa libraries.
+#    Likewise, if VTK_OPENGL_HAS_EGL is ON and VTK_USE_X is ON, then all the OpenGL and EGL variables
+#       should point to the system libraries providing both, typically the NVidia libraries.
+
+configopts += '-DOpenGL_GL_PREFERENCE=GLVND '
+configopts += '-DVTK_REPORT_OPENGL_ERRORS_IN_RELEASE_BUILDS=OFF '
+
+configopts += "-DOPENGL_INCLUDE_DIR=${EBROOTOPENGL}/include "
+configopts += "-DOPENGL_GLX_INCLUDE_DIR=${EBROOTOPENGL}/include "
+configopts += "-DOPENGL_EGL_INCLUDE_DIR=${EBROOTOPENGL}/include "
+# configopts += "-DOPENGL_xmesa_INCLUDE_DIR=IGNORE "
+
+configopts += "-DOPENGL_opengl_LIBRARY=${EBROOTOPENGL}/lib/libOpenGL.so.0 "
+configopts += "-DOPENGL_gl_LIBRARY=${EBROOTOPENGL}/lib/libGL.so "
+configopts += "-DOPENGL_glx_LIBRARY=${EBROOTOPENGL}/lib/libGLX.so.0 "
+configopts += "-DOPENGL_glu_LIBRARY=${EBROOTOPENGL}/lib/libGLU.so "
+configopts += "-DOPENGL_egl_LIBRARY=${EBROOTOPENGL}/lib/libEGL.so.1 "
+
+# OpenGL over X
+configopts += '-DVTK_USE_X=ON '  # OFF:headless rendering
+# already considered by Qt (https://gitlab.kitware.com/lorensen/vtk/commit/b29f6db3f746d84f830c81e4212e48db192e4dbb)
+configopts += '-DVTK_DEFAULT_RENDER_WINDOW_OFFSCREEN=OFF '
+configopts += '-DVTK_OPENGL_HAS_OSMESA=OFF '  # http://www.paraview.org/Wiki/ParaView_And_Mesa_3D
+
+# EGL (off-screen rendering with OpenGL, but without the need for X)
+# call pvserver with –egl-device-index=0 or 1 and –disable-xdisplay-test
+# configopts += '-DVTK_OPENGL_HAS_EGL=ON '
+# configopts += '-DVTK_OPENGL_HAS_OSMESA=OFF '  # http://www.paraview.org/Wiki/ParaView_And_Mesa_3D
+# configopts += '-DVTK_USE_X=OFF '
+# configopts += '-DVTK_DEFAULT_EGL_DEVICE_INDEX=0 '
+# #configopts += '-DEGL_INCLUDE_DIR=${EBROOTOPENGL}/include/EGL/ ' # https://www.khronos.org/registry/EGL/
+# #configopts += '-DEGL_LIBRARY=${EBROOTOPENGL}/lib/libEGL.so.1 '
+# #configopts += '-DEGL_opengl_LIBRARY=${EBROOTOPENGL}/lib/libOpenGL.so.0 '
+# #configopts += '-DEGL_gldispatch_LIBRARY=${EBROOTOPENGL}/lib/libGLdispatch.so.0 ' # <path_to_libGLdispatch.so.0>
+
+# OSMesa (software)
+# With OSMesa the DISPLAY variable has no meaning and is not needed
+# When ON, implies that ParaView can use OSMesa to support headless modes of operation.
+# configopts += '-DVTK_OPENGL_HAS_OSMESA=ON ' # http://www.paraview.org/Wiki/ParaView_And_Mesa_3D
+# configopts += '-DVTK_USE_X=OFF '
+# configopts += '-DVTK_DEFAULT_RENDER_WINDOW_OFFSCREEN=ON '
+# configopts += '-DOSMESA_INCLUDE_DIR=${EBROOTOPENGL}/include '
+# configopts += '-DOSMESA_LIBRARY=${EBROOTOPENGL}/lib/libOSMesa.so '
+
+# Raytracing
+configopts += '-DPARAVIEW_ENABLE_RAYTRACING=ON '
+configopts += '-DVTK_ENABLE_OSPRAY=ON '
+configopts += '-DVTK_ENABLE_VISRTX=OFF '
+
+configopts += '-DPARAVIEW_USE_OSPRAY=ON '
+configopts += "-Dospray_DIR=${EBROOTOSPRAY} "
+configopts += "-Dembree_DIR=${EBROOTEMBREE}/lib64/cmake/embree-3.8.0 "
+configopts += '-DModule_vtkRenderingOSPRay=ON '
+configopts += '-DVTKOSPRAY_ENABLE_DENOISER=OFF '
+
+# --- extra libs --- #
+# configopts += "-DVTKm_DIR=$EBROOTVTKM/lib/cmake/vtkm-1.1/ "
+configopts += '-DPARAVIEW_USE_VTKM=ON '
+configopts += '-DModule_vtkAcceleratorsVTKm=ON '
+configopts += '-DVTKm_Vectorization=AVX2 '
+configopts += '-DVTKm_ENABLE_OPENMP=ON '
+# configopts += '-DVTKm_ENABLE_MPI=ON '
+# configopts += '-DVTKm_ENABLE_LOGGING=ON '
+# configopts += '-DVTKm_ENABLE_CUDA=ON '
+
+configopts += "-DFFMPEG_ROOT=$EBROOTFFMPEG "
+configopts += '-DPARAVIEW_ENABLE_FFMPEG=ON '
+configopts += '-DModule_vtkIOFFMPEG=ON '
+configopts += '-DModule_vtkIOVideo=ON '
+
+configopts += '-DModule_SignedTensor=ON '
+
+configopts += '-DModule_vtkDICOM=ON '
+
+# configopts += '-DModule_vtkFiltersMatlab=OFF '
+configopts += '-DModule_vtkFiltersReebGraph=ON '
+configopts += '-DModule_vtkFiltersSMP=ON '
+configopts += '-DModule_vtkFiltersSelection=ON '
+# configopts += '-DModule_vtkFiltersStatisticsGnu=OFF '
+configopts += '-DModule_vtkFiltersTopology=ON '
+
+# --- coupling --- #
+configopts += '-DPARAVIEW_USE_VISITBRIDGE=ON '
+configopts += '-DPARAVIEW_ENABLE_CATALYST=ON '
+
+# --- development & testing --- #
+configopts += '-DPARAVIEW_INSTALL_DEVELOPMENT_FILES=ON '
+configopts += '-DPARAVIEW_BUILD_DEVELOPER_DOCUMENTATION=OFF '
+configopts += '-DPARAVIEW_BUILD_EXAMPLES=OFF '
+configopts += '-DPARAVIEW_BUILD_TESTING=OFF '
+configopts += '-DPARAVIEW_BUILD_VTK_TESTING=OFF '
+configopts += '-DCTEST_TEST_TIMEOUT=10800 '
+configopts += '-DExternalData_TIMEOUT_INACTIVITY=0 '
+
+# --- XDMF options --- #
+configopts += '-DXDMF_USE_BZIP2=ON '
+configopts += '-DXDMF_USE_GZIP=ON '
+
+# --- VTK external libraries --- #
+configopts += '-DVTK_USE_SYSTEM_EXPAT=ON '
+configopts += '-DVTK_USE_SYSTEM_FREETYPE=ON '
+configopts += '-DVTK_USE_SYSTEM_HDF5=ON '
+configopts += '-DVTK_USE_SYSTEM_JPEG=ON '
+configopts += '-DVTK_USE_SYSTEM_LIBXML2=ON '
+configopts += '-DVTK_USE_SYSTEM_MPI4PY=ON '
+configopts += '-DVTK_USE_SYSTEM_NETCDF=ON '
+configopts += '-DVTK_USE_SYSTEM_PNG=ON '
+configopts += '-DVTK_USE_SYSTEM_PYGMENTS=ON '
+configopts += '-DVTK_USE_SYSTEM_SIX=ON '
+configopts += '-DVTK_USE_SYSTEM_TIFF=ON '
+configopts += '-DVTK_USE_SYSTEM_ZLIB=ON '
+configopts += '-DNETCDF_CXX_ROOT=$EBROOTNETCDFMINCPLUSPLUS '
+configopts += '-DNETCDF_F77_ROOT=$EBROOTNETCDFMINFORTRAN '
+configopts += '-DNETCDF_F90_ROOT=$EBROOTNETCDFMINFORTRAN '
+
+# --- ParaView Plugins --- #
+
+# --- ParaView Plugin Autoload --- #
+# configopts += '-DPARAVIEW_AUTOLOAD_PLUGIN_AnalyzeNIfTIIO=ON '
+# configopts += '-DPARAVIEW_AUTOLOAD_PLUGIN_SurfaceLIC=ON '  # can result in error
+#                     ( 489.245s) [paraview ]vtkOpenGLVertexArrayObj:293 ERR| vtkOpenGLVertexArrayObject (0x3cd7bc0)
+#                     ( 489.245s) [paraview ]vtkOpenGLRenderUtilitie:78 WARN| Error setting 'vertexMC' in shader VAO.
+#                                https://www.paraview.org/pipermail/paraview/2016-March/036518.html
+
+# --- infos
+# -- Plugin: AcceleratedAlgorithms - Testing plugin : Enabled
+#  -- Plugin: AdiosReader - Reader for *.bp files based on Adios : Disabled
+#  -- Plugin: AdiosStagingReader - Performs staging reads from simulations using ADIOS : Disabled
+# -- Plugin: AnalyzeNIfTIIO - Reader/Writer for Analyze and NifTI files : Enabled
+# -- Plugin: ArrowGlyph - Glyph with customizable Arrows : Enabled
+# -- Plugin: CDIReader - ICON netCDF/CDI Reader : Enabled
+# -- Plugin: DigitalRockPhysics - Digital Rock Physics analysis filters : Enabled
+# -- Plugin: EmbossingRepresentations - Embossing representations : Enabled
+# -- Plugin: EyeDomeLighting - Add 3D View with eye-dome Lighting support : Enabled
+# -- Plugin: GMVReader - Reader for binary or ASCII files stored in General Mesh Viewer file format : Enabled
+# -- Plugin: GenericIOReader - GenericIO Reader for HACC data : Enabled
+# -- Plugin: GeodesicMeasurement - Geodesic Measurement : Enabled
+#  -- Plugin: GmshReader - Reader for visualization of high-order polynomial solutions under the Gmsh format : off
+#  -- Plugin: InSituExodus - Experimental memory-conserving Exodus II file reader. : Disabled
+# -- Plugin: LagrangianParticleTracker - Highly customizable filter for particle tracking : Enabled
+# -- Plugin: MooseXfemClip - Clip partial elements generated by MOOSE XFEM : Enabled
+# -- Plugin: Moments - Filters for Flux and Circulation Fields : Enabled
+# -- Plugin: NetCDFTimeAnnotationPlugin - Provides NetCDF Time Annotation filter : Enabled
+#            netcdftime Python module not found! NetCDFTimeAnnotationPlugin not be available until it is installed.
+# -- Plugin 'NetCDFTimeAnnotationPlugin' lists plugin library named 'NetCDFTimeAnnotationPlugin'
+# -- Plugin: NonOrthogonalSource - Non Orthogonal Source code sample : Enabled
+#  -- Plugin: OpenVR - OpenVR Support : Disabled
+#  -- Plugin: PythonQtPlugin - PythonQt Plugin : Disabled
+# -- Plugin: SLACTools - SLAC Tools : Enabled
+# -- Plugin: SierraPlotTools - Sierra Plotting Tools : Enabled
+# -- Plugin: StreamLinesRepresentation - Add animated Stream Lines representation for any type of dataset : Enabled
+# -- Plugin: StreamingParticles - Render Particles with Streaming : Enabled
+# -- Plugin: SurfaceLIC - Add Surface-LIC vector visualization support : Enabled
+#  -- Plugin: TemporalParallelismScriptGenerator - Plugin for creating Python spatio-temporal processing scripts : off
+# -- Plugin: PacMan - Testing plugin : Enabled
+# -- Plugin: ThickenLayeredCells - Filter to thicken layered cells : Enabled
+#  -- Plugin: VRPlugin - Virtual Reality Devices and Interactor styles : Disabled
+# -- Plugin: VTKmFilters - VTKm many-core filters : Enabled
+#  -- Plugin: VaporPlugin - Plugin to read NCAR VDR files : Disabled
+# -- Plugin: pvNVIDIAIndeX - Plugin for NVIDIA IndeX : Enabled
+
+# #########################################################
+# The ParaView server can be cranky, test downloads are quite often failing
+# Using ; insted of && gives a second chance to download the test files, if the first serial attempt would fail.
+# prebuildopts = 'make VTKData ;' # only if: configopts += '-DBUILD_TESTING=ON'
+
+postinstallcmds = ['python -m compileall %(installdir)s/lib64/python3.6/site-packages/']
+#    'cp -a %(builddir)s/ParaView-v%(version)s/  %(installdir)s/src', # copy source from build dir to install dir
+#    '', # move debug info to separate files: 
+#          http://stackoverflow.com/questions/866721/how-to-generate-gcc-debug-symbol-outside-the-build-target
+#    '', # debugedit -i --base-dir=%(builddir)s/ParaView-v%(version)s --dest-dir= %(installdir)s/src <file.debug>
+#        # change path to source in debug info    
+
+modextravars = {'CUDA_VISIBLE_DEVICES': '0,1'}
+
+# OpenSWR fully supports OpenGL 3.0 and most of 3.3, but ParaView requires 3.2 -> clame to fully support 3.2
+modextravars = {'MESA_GL_VERSION_OVERRIDE': '3.2'}
+# modextravars = {'MESA_GLSL_VERSION_OVERRIDE': '??'} 
+
+modextravars = {
+    #  OpenMP will choose an optimum number of threads by default, which is usually the number of cores
+    # 'OMP_NUM_THREADS': '28', # fix number of threads used by paraview filters and parallel sections in the code
+    #  threads used by ospray - details https://github.com/ospray/ospray/blob/release-2.0.x/ospray/api/Device.cpp#L88
+    #  unset => OSPRAY uses all hardware threads
+    # 'OSPRAY_THREADS': '14',     # OSPRay <  2.0
+    # 'OSPRAY_NUM_THREADS': '14', # OSPRay >= 2.0
+    #  When TBB is used for OSPRAY: tbb::task_scheduler_init::default_num_threads() is default if no OSPRAY_NUM_THREADS
+    #    https://github.com/ospray/ospcommon/blob/master/ospcommon/tasking/detail/tasking_system_init.cpp#L47
+    #    https://www.threadingbuildingblocks.org/docs/doxygen/a00150.html
+    #  more ospray definitions: https://www.ospray.org/documentation.html#environment-variables
+    'KNOB_MAX_WORKER_THREADS': '65535',  # max. threads used by OpenSWR (limited by number of hardware threads)
+    #  details in https://gitlab.version.fz-juelich.de/vis/vis-software/issues/14
+    #  more knob defs: https://github.com/mesa3d/mesa/blob/master/src/gallium/docs/source/drivers/openswr/knobs.rst
+}
+
+modextrapaths = {'PYTHONPATH': 'lib64/python%(pyshortver)s/site-packages'}
+
+moduleclass = 'vis'

Golden_Repo/p/ParaView/python-5.8.1-simpleCatalystSupport_0.4.patch

+diff -Naur ParaView-v5.7.0/Wrapping/Python/paraview/simple.py ParaView-v5.7.0-changed/Wrapping/Python/paraview/simple.py
+--- ParaView-v5.7.0.orig/Wrapping/Python/paraview/simple.py	2019-09-26 23:10:51.000000000 +0200
++++ ParaView-v5.7.0/Wrapping/Python/paraview/simple.py	2020-03-04 18:01:36.043382025 +0100
+@@ -47,6 +47,9 @@
+ import sys
+ import warnings
+ 
++from threading import Thread
++from time import sleep, time
++
+ if sys.version_info >= (3,):
+     xrange = range
+ 
+@@ -2443,6 +2446,266 @@
+     view = property(get_view, set_view)
+     source = property(get_source, set_source)
+ 
++
++class CatalystConnection:
++
++    _EventChecker = None
++    _version = "0.4.0"
++
++    def vtkObserver(self, EventObject, EventType):
++        #print(EventType)
++        if EventType is None:
++            return None
++        if EventType == "UpdateEvent": # called for new insitu data
++            for i in range(len(self.updatefunctions)):
++                self.updatefunctions[i]()
++            return True
++        if EventType == "ConnectionCreatedEvent": # called when Connection is established
++            self._connected = True
++            return True
++        if EventType == "ConnectionClosedEvent": # called when Connection is closed
++            self._connected = False
++            self._isPaused = False
++            return True
++        if EventType == "UpdatePropertyEvent":
++            return True
++        if EventType == "PropertyModifiedEvent":
++            return True
++        if EventType == "ModifiedEvent":
++            return True
++        servermanager.vtk.vtkLogger.Log(servermanager.vtk.vtkLogger.VERBOSITY_WARNING, __file__, 31, "Unknown Event Type in catalyst connection: " + EventType)
++        return False
++
++
++    def __init__(self,):
++        self.updatefunctions = []
++        self._connected = False
++        self._session = None
++        self._delay = 0.01
++
++        servermanager.vtkProcessModule.GetProcessModule().MultipleSessionsSupportOn()
++
++        if not CatalystConnection._EventChecker:
++            _EventChecker = CatalystConnection.__EventChecker(self._delay)
++            _EventChecker.StartRegularChecks()
++
++
++    def Start(self, port = 22222):
++        """
++        Open Catalyst port, so the simulation can connect
++        """
++        if self.IsConnected():
++            return False;
++
++        activeConnection = servermanager.ActiveConnection
++
++        self._InProxy = servermanager.CreateProxy("coprocessing","LiveInsituLink")        
++        adaptor = self._InProxy.SafeDownCast(self._InProxy)
++
++        adaptor.AddObserver(servermanager.vtk.vtkCommand.AnyEvent, self.vtkObserver)
++
++        servermanager.vtkSMPropertyHelper(adaptor, "InsituPort").Set(port)
++        servermanager.vtkSMPropertyHelper(adaptor, "ProcessType").Set("Visualization")
++
++        adaptor.UpdateVTKObjects()
++
++        self._session = adaptor.GetSession()
++        self._connection = servermanager.GetConnectionFromId(self._session.ConnectToCatalyst())
++        self._isPaused = False
++
++        self._InProxy.SetInsituProxyManager(self._connection.Session.GetSessionProxyManager())
++
++        adaptor.InvokeCommand("Initialize")
++
++        servermanager.SetActiveConnection(activeConnection)   
++
++
++
++    def IsConnected(self):
++        """
++        True if the simulation is connected, false if the simulation is not yet connected, or disconnected
++        """
++        return self._connected
++
++    def IsPaused(self):
++        """
++        True if the simulation is Paused, false if the simulation is running, or there is not connection to a simulation
++        """
++        return self._isPaused
++
++    def BlockTillConnected(self, timeout = 0):
++        """
++        block till connection is established by simulation, or the timeout in seconds is eclipsed, default is 0, therefore without timeout
++        """
++        start = time()
++        while (time() - start < timeout) or timeout == 0:
++            sleep(self._delay)
++            if self.IsConnected():
++                return True
++        return False;
++
++    def BlockTillNextUpdate(self, timeout = 0):
++        """
++        block till next update happend by simulation, or the timeout in seconds is eclipsed, default is 0, therefore without timeout
++        """
++        start = time()
++        oldUpdates = self.GetTimeStep()
++        while (time() - start < timeout) or timeout == 0:
++            sleep(self._delay)
++            if oldUpdates < self.GetTimeStep():
++                return True
++        return False;
++
++    def BlockTillTimeStepAndPause(self, TimeStep, timeout = 0):
++        """
++        block till time step is reached and then pause the simulation, or the timeout in seconds is eclipsed, default is 0, therefore without timeout.
++        """
++        start = time()
++        while (time() - start < timeout) or timeout == 0:
++            sleep(self._delay)
++            if TimeStep -1 <= self.GetTimeStep(): # needs to step to pause the simulation, therefore activate pause one step early
++                self.SetPauseSimulation(True)
++                return True
++        return False;
++
++
++    def OutputAvaiable(self, ChannelInformation = ['input', 0]):
++        """
++        Check if this combination of ChannelName and port is avaible in simulation data
++        """
++        if self.IsConnected() == False:
++            return False
++        return self.GetCatalystSources().count(ChannelInformation) == 1
++
++
++    def GetCatalystSources(self):
++        """
++        List all avaiable combinations of data output the simulation offers
++        """
++        if self.IsConnected() == False:
++            return None
++        collection = servermanager.vtk.vtkCollection()
++        self._InProxy.GetInsituProxyManager().GetProxies("sources", collection)
++        Channels = []
++        for i in range(collection.GetNumberOfItems()):
++            proxy = collection.GetItemAsObject(i)
++            if proxy.GetVTKClassName() == "vtkPVTrivialProducer":
++                for j in range(proxy.GetNumberOfOutputPorts()):
++                    Channels.append([proxy.GetLogName(), j])
++        return Channels        
++
++
++    def Extract(self, extractName, ChannelInformation = ['input', 0]):
++        """
++        Extract sources from the catalyst connection into the normal pipeline, so it can be used.
++        Returns the Source Object, named extractName. On error returns None.
++        """
++        if self.IsConnected() == False:
++            servermanager.vtk.vtkLogger.Log(servermanager.vtk.vtkLogger.VERBOSITY_WARN, __file__, 144, "Catalyst simulation is not yet connected")
++            return None
++        if self.OutputAvaiable(ChannelInformation) == False:
++            servermanager.vtk.vtkLogger.Log(servermanager.vtk.vtkLogger.VERBOSITY_WARN, __file__, 147, "No output for this channelInformation avaiable: " + str(ChannelInformation))
++            return None
++        if FindSource(extractName) is not None:
++            servermanager.vtk.vtkLogger.Log(servermanager.vtk.vtkLogger.VERBOSITY_WARN, __file__, 150, "There is already a source named " + extractName)
++            return None
++        self.EProxy = self._InProxy.CreateExtract("sources", ChannelInformation[0], ChannelInformation[1])
++        servermanager.ActiveConnection.Session.GetSessionProxyManager().RegisterProxy("sources", extractName, self.EProxy)
++
++        return FindSource(extractName)
++
++    def GetTimeStep(self):
++        """
++        Returns the timeStep of the visible data
++        """
++        return self._InProxy.GetTimeStep()
++
++    def SetPauseSimulation(self, pause):
++        """
++        Allows to pause and unpause the simulation
++        """
++        if self.IsConnected() == False:
++            return
++        if self._isPaused == bool(pause):
++            return
++        self._isPaused = bool(pause)
++        servermanager.vtkSMPropertyHelper(self._InProxy, "SimulationPaused").Set(self._isPaused)
++        self._InProxy.UpdateVTKObjects()
++        if not self._isPaused:
++            self._InProxy.InvokeCommand("LiveChanged")
++
++    def SetLoopDelay(self, delay):
++        self._delay = delay
++        _EventChecker.TimerDelay = delay
++
++    def AddUpdateFunction(self, func):
++        """
++        Add a function that will be called, when the catalyst data is updated.
++        This function will be called without any arguments.
++        """
++        self.updatefunctions.append(func)  
++
++    def LengthUpdateFunctions(self):
++        """
++        Number of functions that will be called, when the catalyst data is updated.
++        """
++        return len(self.updatefunctions)
++
++    def RemoveUpdateFunction(self, func):
++        """
++        Remove a function that would be called, when the catalyst data is updated.
++        """
++        return self.updatefunctions.remove(func)
++
++    def ClearUpdateFunctions(self):
++        """
++        Remove all functions that would be called, when the catalyst data is updated.
++        """
++        self.updatefunctions = []
++
++
++
++
++    class __EventChecker:
++        def __init__(self, delay = 0.01):
++            self.TimerDelay = delay # Delay between calls to check nam for new events
++            self._Running = False
++            self._session = servermanager.ProxyManager().GetSession()
++            self._nam = servermanager.vtkProcessModule.GetProcessModule().GetNetworkAccessManager()
++
++        def CheckForUpdates(self):
++            """
++            Calls processEvents(), till all events are processed
++            """
++            if self._session is None:
++                return
++            if isinstance(self._session, servermanager.vtkSMSessionClient):
++                if not self._session.IsNotBusy():
++                    return
++            while self._nam.ProcessEvents(1):
++                temp = self._nam.ProcessEvents(1)
++
++        def _RegularChecks(self):
++            """
++            starts an infinte loop, regularily calling CheckForUpdates(), needs a valid value set for self.timerDelay
++            """
++            if self._Running:
++                return False
++            self._Running = True
++            self._doRegularChecks = True
++            while self._doRegularChecks:
++                sleep(self.TimerDelay)
++                self.CheckForUpdates()
++            self._Running = False
++
++        def StartRegularChecks(self):
++            """
++            Starts a seperate thread to do regular checks in the background
++            """
++            thread = Thread(target=self._RegularChecks, args=())
++            thread.daemon=True
++            thread.start()
++
+ # -----------------------------------------------------------------------------
+ 
+ class _funcs_internals: