:param exclude_residues: Which residues shouldn't be considered for RMSD (eg. [(1,3), (9,12)] for not considering residue 1,2,3 and residue 9,10,11,12)
:param exclude_residues: Which residues shouldn't be considered for RMSD (eg. [(1,3), (9,12)] for not considering residue 1,2,3 and residue 9,10,11,12)
:type exclude_residues: list
:type exclude_residues: list
:return: RMSD as float, if files do not exist return 0
:return: RMSD as float, if files do not exist return 0