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Commit cb54f15d authored by Jakob Fritz's avatar Jakob Fritz
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Reverted initial changes 

so that Github-Actions now should run again
parent 35d87b69
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Pipeline #169856 passed
Stage: benchmark
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.github/workflows/ci_pipeline.yml
+ 164
− 164
View file @ cb54f15d
......@@ -3,8 +3,8 @@ name: CI pipeline for pySDC
on:
push:
pull_request:
# schedule:
# - cron: '1 5 * * 1'
schedule:
- cron: '1 5 * * 1'
jobs:
......@@ -54,119 +54,119 @@ jobs:
GITLAB_PROJECT_ID: "5992"
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
# user_cpu_tests_linux:
# runs-on: ubuntu-latest
user_cpu_tests_linux:
runs-on: ubuntu-latest
# strategy:
# matrix:
# python: ['3.7', '3.8', '3.9', '3.10']
# env: ['base', 'fenics', 'mpi4py', 'petsc']
strategy:
matrix:
python: ['3.7', '3.8', '3.9', '3.10']
env: ['base', 'fenics', 'mpi4py', 'petsc']
# defaults:
# run:
# shell: bash -l {0}
defaults:
run:
shell: bash -l {0}
# steps:
# - name: Checkout
# uses: actions/checkout@v3
steps:
- name: Checkout
uses: actions/checkout@v3
# - name: Install Conda environment with Micromamba
# uses: mamba-org/setup-micromamba@v1
# with:
# environment-file: "etc/environment-${{ matrix.env }}.yml"
# create-args: >-
# python=${{ matrix.python }}
- name: Install Conda environment with Micromamba
uses: mamba-org/setup-micromamba@v1
with:
environment-file: "etc/environment-${{ matrix.env }}.yml"
create-args: >-
python=${{ matrix.python }}
# - name: Run pytest for CPU stuff
# run: |
# echo "print('Loading sitecustomize.py...')
# import coverage
# coverage.process_startup() " > sitecustomize.py
# coverage run -m pytest --continue-on-collection-errors -v --durations=0 pySDC/tests -m ${{ matrix.env }}
- name: Run pytest for CPU stuff
run: |
echo "print('Loading sitecustomize.py...')
import coverage
coverage.process_startup() " > sitecustomize.py
coverage run -m pytest --continue-on-collection-errors -v --durations=0 pySDC/tests -m ${{ matrix.env }}
# - name: Make coverage report
# run: |
# mv data data_${{ matrix.python }}
# coverage combine
# mv .coverage coverage_${{ matrix.env }}_${{ matrix.python }}.dat
- name: Make coverage report
run: |
mv data data_${{ matrix.python }}
coverage combine
mv .coverage coverage_${{ matrix.env }}_${{ matrix.python }}.dat
# - name: Uploading artifacts
# uses: actions/upload-artifact@v3
# if: matrix.python == '3.10'
# with:
# name: cpu-test-artifacts
# path: |
# data_3.10
# coverage_${{ matrix.env }}_3.10.dat
- name: Uploading artifacts
uses: actions/upload-artifact@v3
if: matrix.python == '3.10'
with:
name: cpu-test-artifacts
path: |
data_3.10
coverage_${{ matrix.env }}_3.10.dat
# user_libpressio_tests:
# runs-on: ubuntu-latest
user_libpressio_tests:
runs-on: ubuntu-latest
# container:
# image: brownbaerchen/libpressio:amd64_2
# volumes:
# - ${{ github.workspace }}:/pySDC
container:
image: brownbaerchen/libpressio:amd64_2
volumes:
- ${{ github.workspace }}:/pySDC
# defaults:
# run:
# shell: bash -l {0}
defaults:
run:
shell: bash -l {0}
# steps:
steps:
# - name: Checkout
# uses: actions/checkout@v3
- name: Checkout
uses: actions/checkout@v3
# - name: Install pySDC and pytest
# run: |
# source /pySDC/pySDC/projects/compression/Docker/install_pySDC.sh
- name: Install pySDC and pytest
run: |
source /pySDC/pySDC/projects/compression/Docker/install_pySDC.sh
# - name: Run pytest
# run: |
# source /opt/spack/share/spack/setup-env.sh
# spack load libpressio
- name: Run pytest
run: |
source /opt/spack/share/spack/setup-env.sh
spack load libpressio
# coverage run -m pytest --continue-on-collection-errors -v --durations=0 pySDC/tests -m libpressio
coverage run -m pytest --continue-on-collection-errors -v --durations=0 pySDC/tests -m libpressio
# - name: Make coverage report
# run: |
# source /opt/spack/share/spack/setup-env.sh
# spack load libpressio
- name: Make coverage report
run: |
source /opt/spack/share/spack/setup-env.sh
spack load libpressio
# mv data data_libpressio
# coverage combine
# mv .coverage coverage_libpressio_3.10.dat
mv data data_libpressio
coverage combine
mv .coverage coverage_libpressio_3.10.dat
# - name: Upload artifacts
# uses: actions/upload-artifact@v3
# with:
# name: cpu-test-artifacts
# path: |
# data_libpressio
# coverage_libpressio_3.10.dat
- name: Upload artifacts
uses: actions/upload-artifact@v3
with:
name: cpu-test-artifacts
path: |
data_libpressio
coverage_libpressio_3.10.dat
# user_cpu_tests_macos:
# runs-on: macos-12
user_cpu_tests_macos:
runs-on: macos-12
# strategy:
# matrix:
# env: ['base', 'fenics', 'mpi4py', 'petsc']
strategy:
matrix:
env: ['base', 'fenics', 'mpi4py', 'petsc']
# defaults:
# run:
# shell: bash -l {0}
defaults:
run:
shell: bash -l {0}
# steps:
# - name: Checkout
# uses: actions/checkout@v3
steps:
- name: Checkout
uses: actions/checkout@v3
# - name: Install Conda environment with Micromamba
# uses: mamba-org/setup-micromamba@v1
# with:
# environment-file: "etc/environment-${{ matrix.env }}.yml"
- name: Install Conda environment with Micromamba
uses: mamba-org/setup-micromamba@v1
with:
environment-file: "etc/environment-${{ matrix.env }}.yml"
# - name: Run pytest for CPU stuff
# run: |
# pytest --continue-on-collection-errors -v --durations=0 pySDC/tests -m ${{ matrix.env }}
- name: Run pytest for CPU stuff
run: |
pytest --continue-on-collection-errors -v --durations=0 pySDC/tests -m ${{ matrix.env }}
wait_for_gitlab:
......@@ -203,50 +203,50 @@ jobs:
# ls -ratl
# post-processing:
# runs-on: ubuntu-latest
post-processing:
runs-on: ubuntu-latest
# if: ${{ github.repository_owner == 'Parallel-in-Time'}}
if: ${{ github.repository_owner == 'Parallel-in-Time'}}
# needs:
# - lint
# - user_cpu_tests_linux
# - user_libpressio_tests
needs:
- lint
- user_cpu_tests_linux
- user_libpressio_tests
# - wait_for_gitlab
# defaults:
# run:
# shell: bash -l {0}
defaults:
run:
shell: bash -l {0}
# steps:
# - name: Checkout
# uses: actions/checkout@v3
steps:
- name: Checkout
uses: actions/checkout@v3
# - name: Install Conda environment with Micromamba
# uses: mamba-org/setup-micromamba@v1
# with:
# environment-file: "etc/environment-base.yml"
- name: Install Conda environment with Micromamba
uses: mamba-org/setup-micromamba@v1
with:
environment-file: "etc/environment-base.yml"
# - name: Downloading artifacts
# uses: actions/download-artifact@v3
# with:
# path: .
- name: Downloading artifacts
uses: actions/download-artifact@v3
with:
path: .
# - name: Prepare artifacts
# run: |
# ls -artl cpu-test-artifacts
# cp cpu-test-artifacts/data_3.10/* data/.
# python -m coverage combine cpu-test-artifacts/coverage_*_3.10.dat
# python -m coverage xml
# python -m coverage html
- name: Prepare artifacts
run: |
ls -artl cpu-test-artifacts
cp cpu-test-artifacts/data_3.10/* data/.
python -m coverage combine cpu-test-artifacts/coverage_*_3.10.dat
python -m coverage xml
python -m coverage html
# - name: Generate Coverage badge
# run: |
# pip install genbadge[all]
# genbadge coverage -i coverage.xml -o htmlcov/coverage-badge.svg
- name: Generate Coverage badge
run: |
pip install genbadge[all]
genbadge coverage -i coverage.xml -o htmlcov/coverage-badge.svg
# - name: Upload coverage reports to Codecov
# uses: codecov/codecov-action@v3
- name: Upload coverage reports to Codecov
uses: codecov/codecov-action@v3
# - name: Generate benchmark report
# uses: pancetta/github-action-benchmark@v1
......@@ -271,13 +271,13 @@ jobs:
# user_email: 'sig.pancetta+github@email.com'
# user_name: 'pancetta'
# - name: Build html I
# run: |
# chmod u+x ./docs/update_apidocs.sh
# ./docs/update_apidocs.sh
# sphinx-build -b html docs/source docs/build/html
# mkdir -p docs/build/html/coverage
# mv htmlcov/* docs/build/html/coverage/.
- name: Build html I
run: |
chmod u+x ./docs/update_apidocs.sh
./docs/update_apidocs.sh
sphinx-build -b html docs/source docs/build/html
mkdir -p docs/build/html/coverage
mv htmlcov/* docs/build/html/coverage/.
# - name: Build html II
# if: "!contains(github.event.head_commit.message, '[CI-no-benchmarks]')"
......@@ -285,18 +285,18 @@ jobs:
# mkdir -p docs/build/html/benchmarks
# cp -r bench/${{ github.head_ref || github.ref_name }}/* docs/build/html/benchmarks/.
# - name: Store docs
# uses: actions/upload-artifact@v3
# with:
# name: docs
# path: docs/build/html
- name: Store docs
uses: actions/upload-artifact@v3
with:
name: docs
path: docs/build/html
# - name: Deploy 🚀
# uses: JamesIves/github-pages-deploy-action@v4
# if: ${{ github.event_name == 'push' && github.repository_owner == 'Parallel-in-Time' && github.ref == 'refs/heads/master' }}
# with:
# branch: gh-pages # The branch the action should deploy to.
# folder: docs/build/html # The folder the action should deploy.
- name: Deploy 🚀
uses: JamesIves/github-pages-deploy-action@v4
if: ${{ github.event_name == 'push' && github.repository_owner == 'Parallel-in-Time' && github.ref == 'refs/heads/master' }}
with:
branch: gh-pages # The branch the action should deploy to.
folder: docs/build/html # The folder the action should deploy.
# spawn_gitlab_and_postprocess:
# runs-on: ubuntu-latest
......
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