readd

This reverts commit 2826f3ce.

src/add_rki_to_map.py

-import os
-import pickle as pkl
-import pandas as pd
-
-data = pd.read_csv('../data/diseases/covid19.csv', sep=',', encoding='iso-8859-1', index_col=0)
-data.index = [pd.Timestamp(date) for date in data.index]
-
-with open('../data/counties/counties.pkl', 'rb') as f:
-    counties = pkl.load(f)
-
-shared_assets = '/p/project/covid19dynstat/shared_assets/'
-figures = os.path.join(shared_assets, 'figures/')
-dates = next(os.walk(figures))[1]
-
-# errors if the RKI based csv is out of date with the available folders
-for date in dates:
-    map_csv_path = os.path.join(figures, date, 'map.csv')   
-    
-    map_rki = data.loc[date.replace('_', '-')].values.astype('float64')
-    for (i, (key, _)) in enumerate(counties.items()):
-        n_people = counties[key]['demographics'][('total', 2018)]
-        map_rki[i] = map_rki[i] / n_people * 100000
-    
-    map_data = pd.read_csv(map_csv_path, index_col=0)
-    map_data["newInf100k_RKI"] = list(map_rki)
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