Adapt Makefile, remove old PDFs, add new PDFs

Makefile

 # Typeset Markdown documentation files for GPU Hackathon Jülich into PDF
 # Individual PDFs for each .md will be created plus one concatenated, large PDF of all .md files.
 #
-# Andreas Herten, March 2017
-# Note: Need cross-reffing for figures? https://github.com/lierdakil/pandoc-crossref!
+# Andreas Herten, March 2017, March 2019
 
 LC = pandoc
 
-LCFLAGS = --latex-engine=xelatex --variable mainfont="PT Serif"
+LCFLAGS = --pdf-engine=xelatex --variable mainfont="PT Serif"
 LCFLAGS += --highlight-style pygments 
-LCFLAGS += --filter convert2pdf/latex-unicode-filter.py
 LCFLAGS += --number-sections
 LCFLAGS += --variable lang:en
 LCFLAGS += --variable colorlinks
@@ -16,25 +14,23 @@ LCFLAGS += --variable geometry:margin=1in
 LCFLAGS += --variable author:"Andreas Herten <a.herten@fz-juelich.de>"
 
 # SRC = $(wildcard *.md)
-SRC = Login.md JURON.md JURECA.md PizDaint.md Batch-Systems.md Profiling-Nvidia_Visual_Profiler-nvprof.md Profiling-scorep-Vampir.md More.md
+SRC = Accounts.md JUWELS.md JURON.md Batch-Systems.md More.md
 
 PDFS = $(SRC:.md=.pdf)
 
 all: $(PDFS) all.pdf
 
-VPATH = convert2pdf
-
 %.pdf: %.md Makefile
-	$(LC) $(LCFLAGS) -o convert2pdf/$@ $<
+	$(LC) $(LCFLAGS) -o pdf/$@ $<
 
 all.pdf: LCFLAGS += --toc 
-all.pdf: LCFLAGS += --variable title:"GPU Eurohack 2017 User Guide"
-all.pdf: LCFLAGS += --variable abstract:"Some hints for participants and mentors of the GPU Hackathon 2017 at Jülich Supercomputing Centre. \textit{Hack Away!}"
+all.pdf: LCFLAGS += --variable title:"GPU Eurohack 2019 User Guide"
+all.pdf: LCFLAGS += --variable abstract:"Some hints for participants and mentors of the GPU Hackathon 2019 at Jülich Supercomputing Centre. \textit{Hack Away!}"
 all.pdf: LCFLAGS += --variable institute:"Forschungszentrum Jülich"
 all.pdf: LCFLAGS += --variable keywords:"GPU,CUDA,OpenACC,FZJ,JSC"
 all.pdf: $(SRC) Makefile
-	$(LC) $(LCFLAGS) -o convert2pdf/$@ $(SRC)
+	$(LC) $(LCFLAGS) -o pdf/$@ $(SRC)
 
 .PHONY: clean
 clean:
-	rm convert2pdf/*.pdf
+	rm pdf/*.pdf

More.md

@@ -24,6 +24,5 @@ Some useful links for further reading
 * Supercomputers
     - [JURECA](http://www.fz-juelich.de/ias/jsc/EN/Expertise/Supercomputers/JURECA/UserInfo/UserInfo_node.html)
     - [JURON](https://trac.version.fz-juelich.de/hbp-pcp/wiki/Public)
-    - [PizDaint](http://user.cscs.ch/getting_started/running_jobs/piz_daint)
 * Other
-    - [JSC Eurohack Gitlab](https://gitlab.version.fz-juelich.de/eurohack/)
+    - [Helmholtz GPU Hackathon Gitlab](https://gitlab.version.fz-juelich.de/gpu-hackathon/)

README.md

@@ -11,3 +11,5 @@ Available documents:
 * [JURON Introduction](JURON.md)
 * [Overview of the Batch Systems](Batch-Systems.md)
 * [More Information and Useful Links](More.md)
+
+See the directory ./pdf/ for PDF version of the files, for example all.pdf.

convert2pdf/latex-unicode-filter.py

-#!/usr/bin/env python2
-# -*- coding: utf-8 -*- 
-
-# Base source: https://github.com/mmechtley/pandoc-filter-test
-
-import panflute as pf
-
-_unicode_tex_replaces = {
-    u'≤': r'\leq{}', u'≥': r'\geq{}',
-    u'≠': r'\neq{}', u'≈': r'\approx{}',
-    u'×': r'\times{}', u'÷': r'\div{}',
-    u'±': r'\pm{}', u'·': r'\cdot{}',
-    u'◦': r'\circ{}', u'′': r'\prime{}',
-    u'∞': r'\infty{}', u'¬': r'\neg{}',
-    u'∧': r'\wedge{}', u'∨': r'\vee{}',
-    u'⊃': r'\supset{}', u'∀': r'\forall{}',
-    u'∈': r'\in{}', u'→': r'\rightarrow{}',
-    u'⊂': r'\subset{}', u'∃': r'\exists{}',
-    u'∉': r'\notin{}', u'⇒': r'\Rightarrow{}',
-    u'∪': r'\cup{}', u'∩': r'\cap{}',
-    u'|': r'\mid{}', u'⇔': r'\Leftrightarrow{}',
-    u'≃': r'\simeq{}', u'≳': r'\gtrsim{}',
-    u'≲': r'\lesssim{}',
-
-    u'α': r'\alpha{}', u'β': r'\beta{}',
-    u'γ': r'\gamma{}', u'δ': r'\delta{}',
-    u'∊': r'\epsilon{}', u'ζ': r'\zeta{}',
-    u'η': r'\eta{}', u'ε': r'\varepsilon{}',
-    u'θ': r'\theta{}', u'ι': r'\iota{}',
-    u'κ': r'\kappa{}', u'𝜗': r'\vartheta{}',
-    u'λ': r'\lambda{}', u'μ': r'\mu{}',
-    u'ν': r'\nu{}', u'ξ': r'\xi{}',
-    u'π': r'\pi{}', u'ρ': r'\rho{}',
-    u'σ': r'\sigma{}', u'τ': r'\tau{}',
-    u'υ': r'\upsilon{}', u'φ': r'\phi{}',
-    u'χ': r'\chi{}', u'ψ': r'\psi{}',
-    u'ω': r'\omega{}',
-    u'Γ': r'\Gamma{}', u'Δ': r'\Delta{}',
-    u'Θ': r'\Theta{}', u'Λ': r'\Lambda{}',
-    u'Ξ': r'\Xi{}', u'Π': r'\Pi{}',
-    u'Σ': r'\Sigma{}', u'Υ': r'\Upsilon{}',
-    u'Φ': r'\Phi{}', u'Ψ': r'\Psi{}',
-    u'Ω': r'\Omega{}'
-}
-
-def unicode_replace(elem, doc):
-    if hasattr(elem, 'text'):
-        found_chars = [key for key in _unicode_tex_replaces.keys()
-                       if key in elem.text]
-        for u_char in found_chars:
-            elem.text = elem.text.replace(
-                u_char, _unicode_tex_replaces[u_char])
-        if len(found_chars) and type(elem) != pf.Math:
-            return pf.Math(text=elem.text, format='InlineMath')
-    return
-
-
-if __name__ == '__main__':
-    pf.toJSONFilter(unicode_replace)