add group name into args

README.md

@@ -87,9 +87,10 @@ If you would like to install PyTorch, you can find the PyTorch NVIDIA container
 you can proceed to build the base NVIDIA image using the following command:
 
 ```bash
-bash scripts/build_base_nvidia_image.sh -A {account} -p {partition} -V {Nvidia_container_version} -N {base_image_name}
+bash scripts/build_base_nvidia_image.sh -A {account}  -G {group_name} -P {partition} -V {Nvidia_container_version} -N {base_image_name}
 ```
 - `account`: The account name for using supercomputers.
+- `group_name`: The group name for using supercomputers (you can find the name of the Group on JuDoor). Sometimes account and group name are the same.
 - `partition`: The partition name on the supercomputer. Please use a partition that has internet access (e.g., `devel`, `develgpus`, `develbooster`, etc.).
 - `Nvidia_container_version`: The Nvidia container (e.g., `nvcr.io/nvidia/pytorch:23.05-py3`).
 - `base_image_name`: The name of the base image with a `.sif` extension (e.g., `pytorch-23-05-py3.sif`).
@@ -98,14 +99,14 @@ bash scripts/build_base_nvidia_image.sh -A {account} -p {partition} -V {Nvidia_c
 Here is the example how to build the base image:
 
 ```bash
-bash scripts/build_base_nvidia_image.sh -A atmlaml -P devel -V nvcr.io/nvidia/pytorch:23.05-py3 -N pytorch-23-05-py3.sif
+bash scripts/build_base_nvidia_image.sh -A atmlaml -G atmlaml -P devel -V nvcr.io/nvidia/pytorch:23.05-py3 -N pytorch-23-05-py3.sif
 ```
 After running scripts/build_base_nvidia_image.sh, a SLURM job will be launched, and a report will be generated in the `slurm_report` path. Please make sure to review this report to confirm that your image was created without any errors.
 
 
 The above command will create an singularity image in the following path:
 
-`/p/project1/{account}/{$USER}/apptainer/pytorch-23-05-py3.sif`
+`/p/project1/{account}/$USER/apptainer/pytorch-23-05-py3.sif`
 
 
 
@@ -116,9 +117,10 @@ Note: Since you are using Nvidia container, PyTorch and other dependencies is al
 If there is a `torch` or `torchvision` inside of `requirements.txt`, please remove it in order to avoid conflict between the Nvidia PyTorch inside of the conatiner.
 
 ```bash
-bash scripts/build_customized_nvidia_image.sh -A {account} -P {partition} -S {absolute_path_base_image} -R {absolute_path_requirements.txt}  -F {final_image_name}
+bash scripts/build_customized_nvidia_image.sh -A {account} -G {group_name} -P {partition} -S {absolute_path_base_image} -R {absolute_path_requirements.txt}  -F {final_image_name}
 ```
 - `account`: The account name for using supercomputers.
+- `group_name`: The group name for using supercomputers (you can find the name of the Group on JuDoor). Sometimes account and group name are the same.
 - `partition`: The partition name on the supercomputer. Please use a partition that has internet access (e.g., `devel`, `develgpus`, `develbooster`, etc.).
 - `absolute_path_base_image`: The absolute path of the base image that was created before.
 - `absolute_path_requirements.txt`: The absolute path of the requirements.txt that all containes all pip dependencies.
@@ -129,7 +131,7 @@ Here is the example how to build the final image:
 
 
 ```bash
-bash scripts/build_customized_nvidia_image.sh -A atmlaml -P devel -S /p/project1/atmlaml/{$USER}/apptainer/pytorch-23-05-py3.sif -R {path_to_requirements}/requirements.txt -F pytorch-23-05-py3-final.sif
+bash scripts/build_customized_nvidia_image.sh -A atmlaml -G atmlaml -P devel -S /p/project1/atmlaml/{$USER}/apptainer/pytorch-23-05-py3.sif -R {path_to_requirements}/requirements.txt -F pytorch-23-05-py3-final.sif
 ```
 
 Check slurm report in `slurm_report` to make sure the singularity image has been created sucessfully. 
@@ -137,7 +139,7 @@ Athe end of this report, if you see `Hello world. This is my Python version` can
 
 You can find the final singularity image in the following path:
 
-`/p/project1/{account}/{$USER}/apptainer/pytorch-23-05-py3-final.sif`
+`/p/project1/{account}/$USER/apptainer/pytorch-23-05-py3-final.sif`
 
 
 Congratulations!!! You have successfully created a singularity image. To use this image for your application, you can find an example submission script in `example_submission_script.sh`.

scripts/build_base_nvidia_image.sh

@@ -5,25 +5,27 @@ ACCOUNT_NAME=""
 PARTITION_NAME=""
 NVIDIA_CONTAINER_VERSION=""
 SINGULARITY_IMG_NAME=""
+GROUP_NAME=""
 
 
 # Parse options
-while getopts "A:P:V:N:" opt; do
+while getopts "A:G:P:V:N:" opt; do
     case $opt in
         A) ACCOUNT_NAME=$OPTARG ;;
+        G) GROUP_NAME=$OPTARG ;;
         P) PARTITION_NAME=$OPTARG ;;
         V) NVIDIA_CONTAINER_VERSION=$OPTARG ;;
         N) SINGULARITY_IMG_NAME=$OPTARG ;;
         *)
-            echo "Usage: $0 -A <account_name> -P <partition_name> -V <nvidia_container_version> -N <singularity_base_img_name>"
+            echo "Usage: $0 -A <account_name> -G <group_name> -P <partition_name> -V <nvidia_container_version> -N <singularity_base_img_name>"
             exit 1
             ;;
     esac
 done
 
 # Check if required arguments are provided
-if [ -z "$ACCOUNT_NAME" ] || [ -z "$PARTITION_NAME" ] || [ -z "$NVIDIA_CONTAINER_VERSION" ] || [ -z "$SINGULARITY_IMG_NAME" ]; then
-    echo "Usage: $0 -A <account_name> -P <partition_name> -V <nvidia_container_version> -N <singularity_base_img_name>"
+if [ -z "$ACCOUNT_NAME" ] || [ -z "$GROUP_NAME" ] || [ -z "$PARTITION_NAME" ] || [ -z "$NVIDIA_CONTAINER_VERSION" ] || [ -z "$SINGULARITY_IMG_NAME" ]; then
+    echo "Usage: $0 -A <account_name> -G <group_name> -P <partition_name> -V <nvidia_container_version> -N <singularity_base_img_name>"
     exit 1
 fi
 
@@ -47,7 +49,7 @@ module load Stages
 module try-load GCC Apptainer-Tools
 
 # Define the directory path
-DIR="/p/project1/${ACCOUNT_NAME}/${USER}/apptainer"
+DIR="/p/project1/${GROUP_NAME}/${USER}/apptainer"
 
 # Ensure directory exists
 if [ ! -d "\$DIR" ]; then
@@ -59,7 +61,7 @@ else
 fi
 
 # Create temporary directory for Apptainer build
-TMP=\$(mktemp -p /p/scratch/${ACCOUNT_NAME}/apptainer -d) || { echo "Failed to create temporary directory"; exit 1; }
+TMP=\$(mktemp -p /p/scratch/${GROUP_NAME}/apptainer -d) || { echo "Failed to create temporary directory"; exit 1; }
 export APPTAINER_TMPDIR=\$TMP
 
 # Create the Singularity definition file in TMP