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Commit 2c0b7905 authored by Falco Weichselbaum's avatar Falco Weichselbaum
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requirements.txt from venv_juwels without 'ml Jupyter/2021.3.1-Python-3.8.5'

parent 943d5cab
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4 merge requests!413update release branch,!412Resolve "release v2.0.0",!349trying a new requirements.txt list that was generated using pipreqs (an...,!335Resolve "upgrade code to TensorFlow V2"
Pipeline #81869 failed
...@@ -11,7 +11,7 @@ module use $OTHERSTAGES ...@@ -11,7 +11,7 @@ module use $OTHERSTAGES
ml Stages/2020 ml Stages/2020
ml GCCcore/.10.3.0 ml GCCcore/.10.3.0
ml Jupyter/2021.3.1-Python-3.8.5 # ml Jupyter/2021.3.1-Python-3.8.5
ml Python/3.8.5 ml Python/3.8.5
ml TensorFlow/2.5.0-Python-3.8.5 ml TensorFlow/2.5.0-Python-3.8.5
ml SciPy-Stack/2021-Python-3.8.5 ml SciPy-Stack/2021-Python-3.8.5
......
## this is basically the "pip list --format=freeze" output from a fully loaded venv_juwels ##
absl-py==0.12.0 absl-py==0.12.0
aiohttp==3.6.2 aiohttp==3.7.4
alabaster==0.7.12
alembic==1.4.2 alembic==1.4.2
altair==3.3.0
ansi2html==1.5.2
ansiwrap==0.8.4
anyio==3.2.1
apipkg==1.5 apipkg==1.5
appdirs==1.4.4 appdirs==1.4.4
appmode==0.6.0
argcomplete==1.12.0 argcomplete==1.12.0
argon2-cffi==20.1.0
arviz==0.10.0
asn1crypto==1.3.0 asn1crypto==1.3.0
astor==0.8.1 astor==0.8.1
astroid==2.4.2
astropy==4.1 astropy==4.1
astunparse==1.6.3 astunparse==1.6.3
async-generator==1.10
async-timeout==3.0.1
atomicwrites==1.4.0 atomicwrites==1.4.0
attrs==19.3.0 attrs==19.3.0
autobahn==19.10.1
Automat==0.8.0
autopep8==1.4.4
Babel==2.7.0
backcall==0.2.0 backcall==0.2.0
backports.shutil-get-terminal-size==1.0.0 backports.shutil-get-terminal-size==1.0.0
backports.tempfile==1.0
backports.weakref==1.0.post1
bcrypt==3.1.7 bcrypt==3.1.7
bitstring==3.1.7 bitstring==3.1.7
black==19.3b0
bleach==3.3.0
blist==1.3.6 blist==1.3.6
bokeh==2.3.2
Bottleneck==1.3.2 Bottleneck==1.3.2
bqplot==0.12.26
CacheControl==0.12.6
cached-property==1.5.2 cached-property==1.5.2
cachetools==4.2.2 cachetools==4.2.2
cachy==0.3.0
certifi==2020.6.20 certifi==2020.6.20
certipy==0.1.3
cffi==1.14.1 cffi==1.14.1
cftime==1.2.1 cftime==1.4.1
chardet==3.0.4 chardet==3.0.4
cleo==0.8.1
click==7.1.2 click==7.1.2
clikit==0.6.2 cloudpickle==1.5.0
cloudpickle==1.6.0
ClusterShell==1.8.3 ClusterShell==1.8.3
colorama==0.4.1
colorcet==2.0.2
commonmark==0.9.1
configparser==5.0.0 configparser==5.0.0
constantly==15.1.0
coverage==5.1 coverage==5.1
crashtest==0.3.1
cryptography==3.0 cryptography==3.0
cssselect==1.1.0
cycler==0.10.0 cycler==0.10.0
Cython==0.29.21 Cython==0.29.21
dash==1.16.0 dask==2.22.0
dash-bio==0.4.8
dash-bootstrap-components==0.10.5
dash-canvas==0.1.0
dash-core-components==1.12.0
dash-cytoscape==0.2.0
dash-daq==0.5.0
dash-html-components==1.1.1
dash-player==0.0.1
dash-renderer==1.8.0
dash-table==4.10.1
dask
datashader==0.11.1
datashape==0.5.2
deap==1.3.1 deap==1.3.1
debugpy==1.4.0
decorator==4.4.2 decorator==4.4.2
defusedxml==0.6.0
deprecation==2.1.0
dicom-upload==0.2.0
dill==0.3.3 dill==0.3.3
distlib==0.3.1
distributed==2.30.1
distro==1.5.0
docutils==0.15.2
ecdsa==0.15 ecdsa==0.15
entrypoints==0.3
execnet==1.7.1 execnet==1.7.1
fastcore==1.3.6
fastscript==1.0.0
filelock==3.0.12
flake8==3.8.3
Flask==1.1.2 Flask==1.1.2
Flask-Caching==1.9.0
Flask-Compress==1.4.0
flatbuffers==1.12 flatbuffers==1.12
flit-core==3.2.0 fsspec==0.8.5
fsspec==0.6.2
funcsigs==1.0.2 funcsigs==1.0.2
future==0.18.2 future==0.18.2
gast==0.4.0 gast==0.4.0
gitdb2==2.0.6
GitPython==3.0.4
google-auth==1.30.0 google-auth==1.30.0
google-auth-oauthlib==0.4.4 google-auth-oauthlib==0.4.4
google-pasta==0.2.0 google-pasta==0.2.0
grako==3.99.9 grako==3.99.9
graphviz==0.13.2
grpcio==1.34.1 grpcio==1.34.1
gviz-api==1.9.0 gviz-api==1.9.0
h5py==3.1.0 h5py==3.1.0
HeapDict==1.0.1
hiredis==1.1.0
holoviews==1.13.2
html5lib==1.1 html5lib==1.1
hyperlink==19.0.0
hypothesis==4.44.2 hypothesis==4.44.2
icc-rt==2020.0.133
idna==2.10 idna==2.10
idna-ssl==1.1.0
imageio==2.9.0
imagesize==1.1.0
importlib-metadata==3.4.0
incremental==17.5.0
iniconfig==1.1.1 iniconfig==1.1.1
intel-openmp==2020.0.133
ipaddress==1.0.23 ipaddress==1.0.23
ipydatawidgets==4.2.0
ipykernel==6.0.3
ipyleaflet==0.14.0
ipympl==0.7.0
ipynb==0.5.1
ipyparallel==6.3.0
ipython==7.16.1 ipython==7.16.1
ipython-genutils==0.2.0 ipython-genutils==0.2.0
ipythonblocks==1.9.0
ipyvolume==0.6.0a8
ipyvue==1.5.0
ipyvuetify==1.6.2
ipywebrtc==0.6.0
ipywidgets==7.6.3
isodate==0.6.0 isodate==0.6.0
isort==4.3.21
itk-core==5.2.1
itk-filtering==5.2.1
itk-io==5.2.1
itk-meshtopolydata==0.7.1
itk-numerics==5.2.1
itk-registration==5.2.1
itk-segmentation==5.2.1
itsdangerous==1.1.0 itsdangerous==1.1.0
jedi==0.17.2 jedi==0.17.2
jeepney==0.6.0
Jinja2==2.11.2 Jinja2==2.11.2
joblib==0.17.0
jsfileupload==0.2.0
json5==0.8.5
jsonschema==3.2.0 jsonschema==3.2.0
jupyter-bokeh==3.0.0
jupyter-client==6.1.12
jupyter-contrib-core==0.3.3
jupyter-contrib-nbextensions==0.5.1
jupyter-core==4.8.1
jupyter-dash==0.4.0
jupyter-highlight-selected-word==0.2.0
jupyter-kernel-gateway==2.5.1
jupyter-latex-envs==1.4.6
jupyter-lsp==1.4.1
jupyter-nbextensions-configurator==0.4.1
jupyter-packaging==0.10.5
jupyter-resource-usage==0.6.0
jupyter-server==1.11.0
jupyter-server-mathjax==0.2.3
jupyter-server-proxy==3.1.0
jupyter-telemetry==0.1.0
jupyterhub==1.4.2
jupyterlab==3.1.12
jupyterlab-code-formatter==1.4.10
jupyterlab-controlbtn==0.5.0
jupyterlab-favorites==3.0.0
jupyterlab-git==0.32.4
jupyterlab-gitlab==3.0.0
jupyterlab-iframe==0.4.0
jupyterlab-latex==3.1.0
jupyterlab-launcher==0.13.1
jupyterlab-lsp==3.8.1
jupyterlab-pygments==0.1.2
jupyterlab-recents==3.0.1
jupyterlab-server==2.8.1
jupyterlab-spellchecker==0.7.1
jupyterlab-system-monitor==0.8.0
jupyterlab-topbar==0.6.1
jupyterlab-tour==3.1.3
jupyterlab-widgets==1.0.2
jupyterthemes==0.20.0
keras-nightly==2.5.0.dev2021032900 keras-nightly==2.5.0.dev2021032900
Keras-Preprocessing==1.1.2 Keras-Preprocessing==1.1.2
keyring==21.8.0
kiwisolver==1.2.0 kiwisolver==1.2.0
lazy-object-proxy==1.4.3
lesscpy==0.14.0
liac-arff==2.4.0 liac-arff==2.4.0
line-profiler==3.1.0 locket==0.2.1
llvmlite==0.36.0
locket==0.2.0
lockfile==0.12.2 lockfile==0.12.2
lxml==4.5.2 lxml==4.5.2
Mako==1.1.3 Mako==1.1.3
Markdown==3.3.4 Markdown==3.3.4
MarkupSafe==1.1.1 MarkupSafe==1.1.1
matplotlib==3.3.1 matplotlib==3.3.1
matplotlib-inline==0.1.2
mccabe==0.6.1
memory-profiler==0.55.0
mistune==0.8.4
mock==4.0.2 mock==4.0.2
more-itertools==8.4.0 more-itertools==8.4.0
mpmath==1.1.0 mpmath==1.1.0
msgpack==1.0.0 msgpack==0.6.2
multidict==4.7.5
multipledispatch==0.6.0
nbclassic==0.3.2
nbclient==0.5.2
nbconvert==6.1.0
nbdime==3.1.0
nbformat==5.1.2
nest-asyncio==1.5.1
netaddr==0.8.0 netaddr==0.8.0
netCDF4==1.5.4 netCDF4==1.5.5.1
netifaces==0.10.9 netifaces==0.10.9
networkx==2.4 networkx==2.4
nose==1.3.7 nose==1.3.7
notebook==6.4.3
numba==0.53.1
numexpr==2.7.1
numpy==1.19.4 numpy==1.19.4
oauthlib==3.1.0 oauthlib==3.1.0
olefile==0.46 olefile==0.46
opt-einsum==3.3.0 opt-einsum==3.3.0
ordered-set==4.0.2 ordered-set==4.0.2
packaging==20.4 packaging==20.4
pamela==1.0.0
pandas==1.1.0 pandas==1.1.0
pandocfilters==1.4.3
panel==0.9.5
papermill==2.2.2
param==1.9.3
paramiko==2.7.1 paramiko==2.7.1
parso==0.7.1 parso==0.7.1
partd==1.1.0
pastel==0.2.1
pathlib2==2.3.5 pathlib2==2.3.5
pathspec==0.6.0
patsy==0.5.1
paycheck==1.0.2 paycheck==1.0.2
pbr==5.4.5 pbr==5.4.5
pep8==1.7.1 pep8==1.7.1
...@@ -265,49 +98,29 @@ pexpect==4.8.0 ...@@ -265,49 +98,29 @@ pexpect==4.8.0
pickleshare==0.7.5 pickleshare==0.7.5
Pillow==7.2.0 Pillow==7.2.0
pip==20.1.1 pip==20.1.1
pkginfo==1.7.0
plotly==4.14.3
pluggy==0.13.1 pluggy==0.13.1
ply==3.11 ply==3.11
poetry==1.1.6
poetry-core==1.0.3
portpicker==1.3.1 portpicker==1.3.1
prometheus-client==0.9.0
prompt-toolkit==3.0.5 prompt-toolkit==3.0.5
protobuf==3.17.3 protobuf==3.17.3
prov==1.5.3 prov==1.5.3
psutil==5.7.2 psutil==5.7.2
psycopg2==2.8.5 psycopg2==2.8.5
ptvsd==4.3.2
ptyprocess==0.6.0 ptyprocess==0.6.0
pvlink==0.3.1
py==1.9.0 py==1.9.0
pyasn1==0.4.8 pyasn1==0.4.8
pyasn1-modules==0.2.8 pyasn1-modules==0.2.8
pycodestyle==2.6.0
pycparser==2.20 pycparser==2.20
pycrypto==2.6.1 pycrypto==2.6.1
pyct==0.4.6
pydicom==1.4.2
pydocstyle==5.0.2
pydot==1.4.1 pydot==1.4.1
pydotplus==2.0.2 pydotplus==2.0.2
pydub==0.23.1
pyflakes==2.2.0
Pygments==2.6.1 Pygments==2.6.1
PyHamcrest==1.9.0
PyJWT==1.7.1
pylev==1.3.0
pylint==2.5.3
pymc3==3.8
PyNaCl==1.4.0 PyNaCl==1.4.0
pynvml==8.0.4
pyOpenSSL==19.1.0
pyparsing==2.4.7 pyparsing==2.4.7
pyrsistent==0.16.0 pyrsistent==0.16.0
pyshp==2.1.3 pyshp==2.1.3
pytest==5.4.3 pytest==5.4.3
pytest-cov==2.10.1 pytest-cov==2.11.1
pytest-forked==1.3.0 pytest-forked==1.3.0
pytest-html==3.1.1 pytest-html==3.1.1
pytest-lazy-fixture==0.6.3 pytest-lazy-fixture==0.6.3
...@@ -315,75 +128,33 @@ pytest-metadata==1.11.0 ...@@ -315,75 +128,33 @@ pytest-metadata==1.11.0
pytest-runner==5.2 pytest-runner==5.2
pytest-sugar==0.9.4 pytest-sugar==0.9.4
pytest-xdist==1.34.0 pytest-xdist==1.34.0
pytest-xprocess==0.13.1
python-dateutil==2.8.1 python-dateutil==2.8.1
python-dotenv==0.10.3
python-editor==1.0.4 python-editor==1.0.4
python-gflags==3.1.2 python-gflags==3.1.2
python-json-logger==0.1.11
python-jsonrpc-server==0.4.0
python-lsp-jsonrpc==1.0.0
python-lsp-server==1.1.0
python-oauth2==1.1.1 python-oauth2==1.1.1
pythreejs==2.3.0
pytz==2020.1 pytz==2020.1
pyunicore==0.9.9
pyviz-comms==2.0.1
PyWavelets==1.1.1
PyYAML==5.3.1 PyYAML==5.3.1
pyzmq==18.1.0 pyzmq==18.1.0
rdflib==5.0.0 rdflib==5.0.0
recommonmark==0.6.0
redis==3.5.3
regex==2019.11.1
requests==2.24.0 requests==2.24.0
requests-oauthlib==1.3.0 requests-oauthlib==1.3.0
requests-toolbelt==0.9.1
requests-unixsocket==0.2.0
retrying==1.3.3
rise==5.7.1
rope==0.16.0
rsa==4.7.2 rsa==4.7.2
Rtree==0.9.4 Rtree==0.9.4
ruamel.yaml==0.16.5
ruamel.yaml.clib==0.1.2
scandir==1.10.0 scandir==1.10.0
scikit-build==0.11.1
scikit-image==0.17.2
scikit-learn==0.23.2
scipy==1.5.2 scipy==1.5.2
seaborn==0.10.1 seaborn==0.10.1
SecretStorage==3.2.0
selenium==3.141.0
Send2Trash==1.5.0
service-identity==18.1.0
setuptools==47.1.0 setuptools==47.1.0
setuptools-scm==4.1.2 setuptools-scm==4.1.2
Shapely==1.7.1
shellingham==1.4.0
sidecar==0.5.1
simpervisor==0.4
simplegeneric==0.8.1 simplegeneric==0.8.1
simplejson==3.17.2 simplejson==3.17.2
singledispatch==3.4.0.3
six==1.15.0 six==1.15.0
smmap2==2.0.5
smopy==0.0.7
sniffio==1.2.0
snowballstemmer==2.0.0
sortedcontainers==2.3.0
SPARQLWrapper==1.8.5 SPARQLWrapper==1.8.5
Sphinx==1.8.5
sphinx-rtd-theme==0.4.3
sphinxcontrib-websupport==1.1.2
SQLAlchemy==1.3.18 SQLAlchemy==1.3.18
statsmodels==0.10.2 statsmodels==0.12.2
sympy==1.6.1 sympy==1.6.1
tabulate==0.8.8 tabulate==0.8.8
tailer==0.4.1
TatSu==5.5.0 TatSu==5.5.0
tblib==1.7.0 tblib==1.7.0
tenacity==6.0.0
tensorboard==2.5.0 tensorboard==2.5.0
tensorboard-data-server==0.6.1 tensorboard-data-server==0.6.1
tensorboard-plugin-profile==2.4.0 tensorboard-plugin-profile==2.4.0
...@@ -391,52 +162,18 @@ tensorboard-plugin-wit==1.8.0 ...@@ -391,52 +162,18 @@ tensorboard-plugin-wit==1.8.0
tensorflow==2.5.0 tensorflow==2.5.0
tensorflow-estimator==2.5.0 tensorflow-estimator==2.5.0
termcolor==1.1.0 termcolor==1.1.0
terminado==0.10.1
testpath==0.4.4
textwrap3==0.9.2
Theano==1.0.4
threadpoolctl==2.2.0
tifffile==2020.10.1
tikzplotlib==0.9.8
toml==0.10.1 toml==0.10.1
tomlkit==0.7.0
toolz==0.10.0 toolz==0.10.0
tornado==6.1
tornado-proxy-handlers==0.0.5
tqdm==4.56.0
traitlets==4.3.3 traitlets==4.3.3
traits==6.1.1 traits==6.1.1
traittypes==0.2.1
Twisted==19.7.0
txaio==18.8.1
typed-ast==1.4.2
typing-extensions==3.7.4 typing-extensions==3.7.4
ujson==3.2.0
urllib3==1.25.10 urllib3==1.25.10
vcversioner==2.16.0.0 vcversioner==2.16.0.0
vega-datasets==0.8.0
version-information==1.0.3
vincent==0.4.4
virtualenv==20.4.6
voila==0.2.10
voila-gridstack==0.2.0
voila-material==0.4.0
voila-vuetify==0.5.2
wcwidth==0.2.5 wcwidth==0.2.5
webencodings==0.5.1 webencodings==0.5.1
websocket-client==1.1.0
websockify==0.9.0
Werkzeug==2.0.0 Werkzeug==2.0.0
wget==3.2 wget==3.2
wheel==0.35.0 wheel==0.35.0
widgetsnbextension==3.5.1
wrapt==1.12.1 wrapt==1.12.1
wslink==0.1.13 xarray==0.16.0
xarray==0.16.2
XlsxWriter==1.2.9 XlsxWriter==1.2.9
yapf==0.28.0
yarl==1.6.3
zict==2.0.0
zipp==3.4.0
zope.interface==4.7.2
zstandard==0.12.0
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