can now continue with training, /close #30

run.py

src/helpers.py

src/model_modules/keras_extensions.py

src/model_modules/model_class.py

src/plotting/training_monitoring.py

src/run_modules/model_setup.py

src/run_modules/pre_processing.py

src/run_modules/training.py

test/test_helpers.py

test/test_model_modules/test_keras_extensions.py

test/test_modules/test_model_setup.py

test/test_modules/test_pre_processing.py

test/test_modules/test_training.py

test/test_plotting/test_training_monitoring.py