Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
MLAir
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Container registry
Model registry
Operate
Environments
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
esde
machine-learning
MLAir
Commits
df0731ff
Commit
df0731ff
authored
3 years ago
by
leufen1
Browse files
Options
Downloads
Patches
Plain Diff
update tests
parent
98944e17
No related branches found
No related tags found
4 merge requests
!430
update recent developments
,
!413
update release branch
,
!412
Resolve "release v2.0.0"
,
!378
Resolve "filter dh: differentiate between history offset and information offset"
Pipeline
#88498
passed
3 years ago
Stage: test
Stage: docs
Stage: pages
Stage: deploy
Changes
2
Pipelines
1
Show whitespace changes
Inline
Side-by-side
Showing
2 changed files
mlair/helpers/filter.py
+6
-13
6 additions, 13 deletions
mlair/helpers/filter.py
test/test_helpers/test_filter.py
+5
-4
5 additions, 4 deletions
test/test_helpers/test_filter.py
with
11 additions
and
17 deletions
mlair/helpers/filter.py
+
6
−
13
View file @
df0731ff
...
@@ -640,8 +640,7 @@ class ClimateFIRFilter(FIRFilter):
...
@@ -640,8 +640,7 @@ class ClimateFIRFilter(FIRFilter):
@staticmethod
@staticmethod
def
_trim_data_to_minimum_length
(
data
:
xr
.
DataArray
,
extend_length_history
:
int
,
dim
:
str
,
def
_trim_data_to_minimum_length
(
data
:
xr
.
DataArray
,
extend_length_history
:
int
,
dim
:
str
,
minimum_length
:
int
=
None
,
extend_length_future
:
int
=
0
,
extend_length_future
:
int
=
0
)
->
xr
.
DataArray
:
offset
:
int
=
0
)
->
xr
.
DataArray
:
"""
"""
Trim data along given axis between either -minimum_length (if given) or -extend_length_history and
Trim data along given axis between either -minimum_length (if given) or -extend_length_history and
extend_length_opts (which is default set to 0).
extend_length_opts (which is default set to 0).
...
@@ -650,14 +649,9 @@ class ClimateFIRFilter(FIRFilter):
...
@@ -650,14 +649,9 @@ class ClimateFIRFilter(FIRFilter):
:param extend_length_history: start number for trim range (transformed to negative), only used if parameter
:param extend_length_history: start number for trim range (transformed to negative), only used if parameter
minimum_length is not provided
minimum_length is not provided
:param dim: dim to apply trim on
:param dim: dim to apply trim on
:param minimum_length: start number for trim range (transformed to negative), preferably used (default None)
:param extend_length_future: number to use in
"
future
"
:param extend_length_future: number to use in
"
future
"
:returns: trimmed data
:returns: trimmed data
"""
"""
# if minimum_length is None:
# return data.sel({dim: slice(-extend_length_history, extend_length_future)}, drop=True)
# else:
# return data.sel({dim: slice(-minimum_length + offset, extend_length_future)}, drop=True)
return
data
.
sel
({
dim
:
slice
(
-
extend_length_history
,
extend_length_future
)},
drop
=
True
)
return
data
.
sel
({
dim
:
slice
(
-
extend_length_history
,
extend_length_future
)},
drop
=
True
)
@staticmethod
@staticmethod
...
@@ -749,13 +743,12 @@ class ClimateFIRFilter(FIRFilter):
...
@@ -749,13 +743,12 @@ class ClimateFIRFilter(FIRFilter):
# trim data if required
# trim data if required
valid_range_end
=
int
(
filt
.
coords
[
new_dim
].
max
()
-
(
length
+
1
)
/
2
)
+
1
valid_range_end
=
int
(
filt
.
coords
[
new_dim
].
max
()
-
(
length
+
1
)
/
2
)
+
1
trimmed
=
self
.
_trim_data_to_minimum_length
(
filt
,
extend_length_history
,
new_dim
,
minimum_length
+
int
((
next_order
+
1
)
/
2
),
ext_len
=
min
(
extend_length_future
,
valid_range_end
)
extend_length_future
=
min
(
extend_length_future
,
valid_range_end
)
,
trimmed
=
self
.
_trim_data_to_minimum_length
(
filt
,
extend_length_history
,
new_dim
,
offset
=
offset
)
extend_length_future
=
ext_len
)
filt_coll
.
append
(
trimmed
)
filt_coll
.
append
(
trimmed
)
trimmed
=
self
.
_trim_data_to_minimum_length
(
filter_input_data
,
extend_length_history
,
new_dim
,
minimum_length
+
int
((
next_order
+
1
)
/
2
),
trimmed
=
self
.
_trim_data_to_minimum_length
(
filter_input_data
,
extend_length_history
,
new_dim
,
extend_length_future
=
min
(
extend_length_future
,
valid_range_end
),
extend_length_future
=
ext_len
)
offset
=
offset
)
filt_input_coll
.
append
(
trimmed
)
filt_input_coll
.
append
(
trimmed
)
# visualization
# visualization
...
...
This diff is collapsed.
Click to expand it.
test/test_helpers/test_filter.py
+
5
−
4
View file @
df0731ff
...
@@ -297,10 +297,11 @@ class TestClimateFIRFilter:
...
@@ -297,10 +297,11 @@ class TestClimateFIRFilter:
res
=
obj
.
_trim_data_to_minimum_length
(
xr_array
,
5
,
"
window
"
)
res
=
obj
.
_trim_data_to_minimum_length
(
xr_array
,
5
,
"
window
"
)
assert
xr_array
.
shape
==
(
21
,
100
,
1
)
assert
xr_array
.
shape
==
(
21
,
100
,
1
)
assert
res
.
shape
==
(
6
,
100
,
1
)
assert
res
.
shape
==
(
6
,
100
,
1
)
res
=
obj
.
_trim_data_to_minimum_length
(
xr_array
,
5
,
"
window
"
,
10
)
assert
res
.
shape
==
(
11
,
100
,
1
)
res
=
obj
.
_trim_data_to_minimum_length
(
xr_array
,
30
,
"
window
"
)
res
=
obj
.
_trim_data_to_minimum_length
(
xr_array
,
30
,
"
window
"
)
assert
res
.
shape
==
(
21
,
100
,
1
)
assert
res
.
shape
==
(
21
,
100
,
1
)
xr_array
=
obj
.
_shift_data
(
xr_array
.
sel
(
window
=
0
),
range
(
-
20
,
5
),
time_dim
,
new_dim
=
"
window
"
)
res
=
obj
.
_trim_data_to_minimum_length
(
xr_array
,
5
,
"
window
"
,
extend_length_future
=
2
)
assert
res
.
shape
==
(
8
,
100
,
1
)
def
test_create_full_filter_result_array
(
self
,
xr_array
,
time_dim
):
def
test_create_full_filter_result_array
(
self
,
xr_array
,
time_dim
):
obj
=
object
.
__new__
(
ClimateFIRFilter
)
obj
=
object
.
__new__
(
ClimateFIRFilter
)
...
@@ -320,7 +321,7 @@ class TestClimateFIRFilter:
...
@@ -320,7 +321,7 @@ class TestClimateFIRFilter:
assert
len
(
res
)
==
5
assert
len
(
res
)
==
5
# check filter data properties
# check filter data properties
assert
res
[
0
].
shape
==
(
*
xr_array_long_with_var
.
shape
,
24
+
2
)
assert
res
[
0
].
shape
==
(
*
xr_array_long_with_var
.
shape
,
int
(
filter_order
+
1
)
/
2
+
24
+
2
)
assert
res
[
0
].
dims
==
(
*
xr_array_long_with_var
.
dims
,
"
window
"
)
assert
res
[
0
].
dims
==
(
*
xr_array_long_with_var
.
dims
,
"
window
"
)
# check filter properties
# check filter properties
...
@@ -350,7 +351,7 @@ class TestClimateFIRFilter:
...
@@ -350,7 +351,7 @@ class TestClimateFIRFilter:
var_dim
=
var_dim
,
new_dim
=
"
total_new_dim
"
,
window
=
(
"
kaiser
"
,
5
),
minimum_length
=
1000
,
var_dim
=
var_dim
,
new_dim
=
"
total_new_dim
"
,
window
=
(
"
kaiser
"
,
5
),
minimum_length
=
1000
,
apriori
=
apriori
,
plot_dates
=
plot_dates
)
apriori
=
apriori
,
plot_dates
=
plot_dates
)
assert
res
[
0
].
shape
==
(
*
xr_array_long_with_var
.
shape
,
1000
+
2
)
assert
res
[
0
].
shape
==
(
*
xr_array_long_with_var
.
shape
,
int
(
10
*
24
+
1
+
1
)
/
2
+
1000
+
2
)
assert
res
[
0
].
dims
==
(
*
xr_array_long_with_var
.
dims
,
"
total_new_dim
"
)
assert
res
[
0
].
dims
==
(
*
xr_array_long_with_var
.
dims
,
"
total_new_dim
"
)
assert
np
.
testing
.
assert_almost_equal
(
assert
np
.
testing
.
assert_almost_equal
(
res
[
2
],
obj
.
_calculate_filter_coefficients
((
"
kaiser
"
,
5
),
filter_order
,
0.05
,
24
))
is
None
res
[
2
],
obj
.
_calculate_filter_coefficients
((
"
kaiser
"
,
5
),
filter_order
,
0.05
,
24
))
is
None
...
...
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment